From a26ba2509cc35c06e9f3d259e1966e5c9c14074e Mon Sep 17 00:00:00 2001
From: "Andrew G. Brown" <andrew.g.brown@usda.gov>
Date: Mon, 13 Nov 2023 16:04:21 -0800
Subject: [PATCH] Fix docs for SoilProfileCollection method aliases

---
 R/SoilProfileCollection-operators.R           | 4 ++--
 R/plotSPC.R                                   | 2 +-
 man/SoilProfileCollection-plotting-methods.Rd | 1 +
 man/doublebracket-set.Rd                      | 1 +
 man/doublebracket.Rd                          | 3 ++-
 5 files changed, 7 insertions(+), 4 deletions(-)

diff --git a/R/SoilProfileCollection-operators.R b/R/SoilProfileCollection-operators.R
index 349d09595..d3c195f98 100644
--- a/R/SoilProfileCollection-operators.R
+++ b/R/SoilProfileCollection-operators.R
@@ -362,7 +362,7 @@ setMethod("[", signature(x = "SoilProfileCollection"),
 #' @param x a SoilProfileCollection
 #' @param i an expression resolving to a single column name in site or horizon table
 #' @param j (not used)
-#' @aliases [[,SoilProfileCollection,ANY-method, [[,SoilProfileCollection,ANY,ANY-method
+#' @aliases [[,SoilProfileCollection-method [[,SoilProfileCollection,ANY-method [[,SoilProfileCollection,ANY,ANY-method 
 #' @docType methods
 #' @rdname doublebracket
 #' @examples
@@ -443,7 +443,7 @@ setMethod("[[", signature(x = "SoilProfileCollection",
 #' @param value New value to replace -- unit length or equal in length to number
 #'   of sites or horizons in the collection.
 #'
-#' @aliases [[<-,SoilProfileCollection,ANY,ANY-method
+#' @aliases [[<-,SoilProfileCollection-method, [[<-,SoilProfileCollection,ANY,ANY-method 
 #' @docType methods
 #' @rdname doublebracket-set
 setReplaceMethod("[[", signature(x = "SoilProfileCollection",
diff --git a/R/plotSPC.R b/R/plotSPC.R
index 38ec04c5f..62b9a0d14 100644
--- a/R/plotSPC.R
+++ b/R/plotSPC.R
@@ -1693,7 +1693,7 @@ plotSPC <- function(
 #' generic plot method for \code{SoilProfileCollection} objects
 #' @name plot
 #' @param y (not used)
-#' @aliases plot,SoilProfileCollection,ANY-method
+#' @aliases plot,SoilProfileCollection-method plot,SoilProfileCollection,ANY-method
 #' @rdname SoilProfileCollection-plotting-methods
 #' @export
 setMethod("plot", signature(x = "SoilProfileCollection",
diff --git a/man/SoilProfileCollection-plotting-methods.Rd b/man/SoilProfileCollection-plotting-methods.Rd
index f86b68a3f..04f6a75ef 100644
--- a/man/SoilProfileCollection-plotting-methods.Rd
+++ b/man/SoilProfileCollection-plotting-methods.Rd
@@ -5,6 +5,7 @@
 \alias{plotSPC}
 \alias{plot,SoilProfileCollection,ANY-method,plot.SoilProfileCollection}
 \alias{plot}
+\alias{plot,SoilProfileCollection-method}
 \alias{plot,SoilProfileCollection,ANY-method}
 \title{Create Soil Profile Sketches}
 \usage{
diff --git a/man/doublebracket-set.Rd b/man/doublebracket-set.Rd
index 94ba0f4c3..1436f388d 100644
--- a/man/doublebracket-set.Rd
+++ b/man/doublebracket-set.Rd
@@ -3,6 +3,7 @@
 \docType{methods}
 \name{[[<-}
 \alias{[[<-}
+\alias{[[<-,SoilProfileCollection-method,}
 \alias{[[<-,SoilProfileCollection,ANY,ANY-method}
 \title{Add or change column of horizon or site data in a SoilProfileCollection}
 \usage{
diff --git a/man/doublebracket.Rd b/man/doublebracket.Rd
index 172a5607c..02dc988a8 100644
--- a/man/doublebracket.Rd
+++ b/man/doublebracket.Rd
@@ -3,7 +3,8 @@
 \docType{methods}
 \name{[[}
 \alias{[[}
-\alias{[[,SoilProfileCollection,ANY-method,}
+\alias{[[,SoilProfileCollection-method}
+\alias{[[,SoilProfileCollection,ANY-method}
 \alias{[[,SoilProfileCollection,ANY,ANY-method}
 \title{Get column of horizon or site data in a SoilProfileCollection}
 \usage{