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Fix OME for exporting TIFF and .czi #1

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ergonyc opened this issue Oct 11, 2022 · 0 comments
Open

Fix OME for exporting TIFF and .czi #1

ergonyc opened this issue Oct 11, 2022 · 0 comments
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enhancement New feature or request question Further information is requested

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@ergonyc
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ergonyc commented Oct 11, 2022

Is your feature request related to a problem? Please describe.
Currently the code can write "ome-tiff"s but they do not include the FULL meta-data including the microscope meta data which is improperly imported from the .czi file.

Describe the solution you'd like
The tiff format should be able to encapsulate ALL the metadata in an OME format... but need to investigate which are the proper fields in the OME schema to do things.

SPECIFICALLY: -> which Z-slice are we setting to "optimal" for downstream... this is crucial
@ergonyc ergonyc added enhancement New feature or request question Further information is requested labels Oct 11, 2022
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