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adelavega committed Nov 27, 2023
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Expand Up @@ -27,9 +27,6 @@ For more guidance on how to choose a topic for meta-analysis, see the [PRISMA st
We'll step through this process in detail.

To get started, *sign in*, and select **New Project**.
Give your project a *Name* and a *Description*. You can always change these later.

![Description](/tutorial/create_project.png)

You'll now see the Project page, showing the three stages of a meta-analysis:
**Search & Curate, Extract & Annotate** and **Specify Meta-Analyses**.
Expand Down Expand Up @@ -227,17 +224,16 @@ Click on any Study to edit:

Let's start by editing a Study's Analyses.

*Analyses* are results reported in a given study from a specific analysis. You may know this as "Contrasts".

For new studies, we will not have any data, and it is necessary to manually enter these data from the text of a study.

![Extraction study view](/tutorial/study_with_no_analyses.png)
![Extraction study view](/tutorial/add_coordinates.png)

For studies with no data, you can create new Analyses, and input the Coordinates reported in the text:
:::info
*Analyses* are groups of images or coordinates reported in a given study fir a specific analysis. This is often referred to as "Contrasts", but we use the more general term "Analyses" to accomodate a wider range of fMRI models.
:::

![Extraction study view](/tutorial/add_coordinates.png)
For new studies, we will not have any data, and it is necessary to manually enter these data from the text of a study.
We can create a new Analysis for each group of Coordinates, and input the data from the text:

Fortunately, for studies already indexed by NeuroStore, we will already have pre-extracted Coordinates. You can use this same interface to verify and correct these data.
For studies already indexed by NeuroStore, we will already have pre-extracted Coordinates. You can use this same interface to verify and correct these data.

:::caution
Automatically extracted coordinates can contain a number of errors. Mostly commonly, several distinct Analyses (i.e. contrasts), will get grouped into a single Analyses. You will want to create new Analyses to split up the Coordinates into distinct units.
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