[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

docs/source/conf.py

@@ -2,6 +2,7 @@
     Purpose: A Python script holding the configuration of the project. Contains the project
     name and release information as well as some extra configuration keys.
 """
+
 import os
 import sys
 import versioningit

src/shiver/configuration.py

@@ -1,6 +1,7 @@
 """Module to load the the settings from SHOME/.shiver/configuration.ini file
 
 Will fall back to a default"""
+
 import os
 import shutil
 

src/shiver/models/convert_dgs_to_single_mde.py

@@ -1,4 +1,5 @@
 """The Shiver ConvertDGSToSingleMDE mantid algorithm"""
+
 # pylint: disable=no-name-in-module
 import numpy
 from mantid.simpleapi import (
@@ -223,9 +224,9 @@ def validateInputs(self):
                 if len(tib) != 2:
                     raise ValueError("length is not 2")
             except ValueError:
-                issues[
-                    "TimeIndependentBackground"
-                ] = "This must be either 'Default' or two numbers separated by a comma"
+                issues["TimeIndependentBackground"] = (
+                    "This must be either 'Default' or two numbers separated by a comma"
+                )
         ad_dims = self.getPropertyValue("AdditionalDimensions")
         if ad_dims:
             ad_dims = ad_dims.split(",")

src/shiver/models/corrections.py

@@ -1,4 +1,5 @@
 """Model for Corrections tab"""
+
 # pylint: disable=no-name-in-module
 import time
 from typing import Tuple

src/shiver/models/generate.py

@@ -1,4 +1,5 @@
 """Model for the Generate tab"""
+
 import ast
 from pathlib import Path
 from mantid.api import (  # pylint: disable=no-name-in-module

src/shiver/models/generate_dgs_mde.py

@@ -1,4 +1,5 @@
 """The Shiver GenerateDGSMDE mantid algorithm"""
+
 # pylint: disable=no-name-in-module
 import json
 import numpy
@@ -186,9 +187,9 @@ def validateInputs(self):
                 if len(tib) != 2:
                     raise ValueError("length is not 2")
             except ValueError:
-                issues[
-                    "TimeIndependentBackground"
-                ] = "This must be either 'Default' or two numbers separated by a comma"
+                issues["TimeIndependentBackground"] = (
+                    "This must be either 'Default' or two numbers separated by a comma"
+                )
         ad_dims = self.getPropertyValue("AdditionalDimensions")
         if ad_dims:
             ad_dims = ad_dims.split(",")
@@ -205,9 +206,9 @@ def validateInputs(self):
             self.getProperty("Type").value == "Background (minimized by angle and energy)"
             and self.getProperty("DetectorGroupingFile").value == ""
         ):
-            issues[
-                "DetectorGroupingFile"
-            ] = "A grouping file is required when for 'Background (minimized by angle and energy)'"
+            issues["DetectorGroupingFile"] = (
+                "A grouping file is required when for 'Background (minimized by angle and energy)'"
+            )
 
         return issues
 

src/shiver/models/help.py

@@ -1,4 +1,5 @@
 """ single help module """
+
 import webbrowser
 from shiver.configuration import get_data
 

src/shiver/models/histogram.py

@@ -1,4 +1,5 @@
 """Model for the Histogram tab"""
+
 import time
 import os.path
 from typing import Tuple

src/shiver/models/makeslice.py

@@ -1,4 +1,5 @@
 """The Shiver MakeSlice mantid algorithm"""
+
 # pylint: disable=no-name-in-module
 
 from mantid.api import (

src/shiver/models/makeslices.py

@@ -1,4 +1,5 @@
 """The Shiver MakeSFCorrectedSlices mantid algorithm"""
+
 # pylint: disable=no-name-in-module
 
 from mantid.api import (

src/shiver/models/polarized.py

@@ -1,4 +1,5 @@
 """Model for the Sample Parameters dialog"""
+
 # pylint: disable=no-name-in-module
 from mantid.simpleapi import mtd, AddSampleLog
 from mantid.kernel import Logger

src/shiver/models/sample.py

@@ -1,4 +1,5 @@
 """Model for the Sample Parameters dialog"""
+
 import numpy
 
 # pylint: disable=no-name-in-module

src/shiver/presenters/generate.py

@@ -1,4 +1,5 @@
 """Presenter for the Generate tab"""
+
 import json
 
 CONFIG_TEMPLATE = """#!/usr/bin/env python

src/shiver/presenters/histogram.py

@@ -1,4 +1,5 @@
 """Presenter for the Histogram tab"""
+
 import os
 from qtpy.QtWidgets import QWidget
 from shiver.views.corrections import Corrections

src/shiver/presenters/sample.py

@@ -1,4 +1,5 @@
 """Presenter for the Sample Parameters dialog"""
+
 from copy import deepcopy
 
 

src/shiver/views/advanced_options.py

@@ -1,4 +1,5 @@
 """PyQt QDialog for Sample Parameters"""
+
 import re
 
 from qtpy import QtGui

src/shiver/views/corrections.py

@@ -1,4 +1,5 @@
 """PyQt widget for the correction tab"""
+
 # pylint: disable=no-name-in-module
 from qtpy.QtWidgets import (
     QWidget,

src/shiver/views/data.py

@@ -1,4 +1,5 @@
 """PyQt widget for the raw data selection"""
+
 import os
 import glob
 

src/shiver/views/generate.py

@@ -1,4 +1,5 @@
 """PyQt widget for the histogram tab"""
+
 import re
 import os
 import itertools

src/shiver/views/histogram.py

@@ -1,4 +1,5 @@
 """PyQt widget for the histogram tab"""
+
 from qtpy.QtWidgets import QWidget, QHBoxLayout, QErrorMessage, QMessageBox
 from qtpy.QtCore import Signal
 

src/shiver/views/histogram_parameters.py

@@ -1,4 +1,5 @@
 """PyQt QGroupBox for the histogram parameters"""
+
 import numpy
 from qtpy import QtGui
 from qtpy.QtWidgets import (

src/shiver/views/invalid_styles.py

@@ -1,4 +1,5 @@
 """CSS styles invalid fields"""
+
 INVALID_QLINEEDIT = """
 QLineEdit {
 border-color: red;

src/shiver/views/loading_buttons.py

@@ -1,4 +1,5 @@
 """PyQt widget for the histogram tab"""
+
 import importlib
 import os
 from qtpy.QtWidgets import (

src/shiver/views/oncat.py

@@ -1,4 +1,5 @@
 """PyQt widget for the OnCat widget in General tab."""
+
 import os
 import json
 import oauthlib

src/shiver/views/plots.py

@@ -1,4 +1,5 @@
 """Functions to plot histograms"""
+
 import matplotlib.pyplot as plt
 from mantidqt.widgets.sliceviewer.presenters.presenter import SliceViewer
 from mantidqt.plotting.functions import manage_workspace_names, plot_md_ws_from_names

src/shiver/views/polarized_options.py

@@ -1,4 +1,5 @@
 """PyQt QDialog for Sample Parameters"""
+
 from qtpy import QtGui
 from qtpy.QtWidgets import (
     QWidget,

src/shiver/views/reduction_parameters.py

@@ -1,4 +1,5 @@
 """PyQt widget for the Reduction Parameters section"""
+
 from qtpy import QtGui
 from qtpy.QtWidgets import (
     QWidget,

src/shiver/views/refine_ub.py

@@ -1,4 +1,5 @@
 """View for the Refine UB widget"""
+
 import types
 from qtpy.QtWidgets import (
     QWidget,

src/shiver/views/sample.py

@@ -1,4 +1,5 @@
 """PyQt QDialog for Sample Parameters"""
+
 from qtpy import QtGui
 from qtpy.QtWidgets import (
     QWidget,

src/shiver/views/workspace_icons.py

@@ -1,4 +1,5 @@
 """PyQt widget for the workspace icons"""
+
 from qtpy.QtWidgets import QLabel, QWidget, QFormLayout
 from qtpy.QtCore import QSize
 from qtpy.QtGui import QIcon, QPixmap

src/shiver/views/workspace_tables.py

@@ -1,4 +1,5 @@
 """PyQt widget for the histogram tab input workspaces"""
+
 from functools import partial
 from enum import Enum
 from qtpy.QtWidgets import (

tests/conftest.py

@@ -1,4 +1,5 @@
 """pytest config"""
+
 import os
 from configparser import ConfigParser
 

tests/models/test_configuration.py

@@ -1,4 +1,5 @@
 """Tests for Configuration mechanism"""
+
 import os
 from configparser import ConfigParser
 from pathlib import Path

tests/models/test_gather_history.py

@@ -1,4 +1,5 @@
 """Test for histogram model."""
+
 import os
 import pytest
 

tests/models/test_generatemde.py

@@ -1,4 +1,5 @@
 """Tests for the ConvertDGSToSingleMDE algorithm"""
+
 import os
 from pytest import approx, raises
 from mantid.simpleapi import (  # pylint: disable=no-name-in-module

tests/models/test_histogram_saving.py

@@ -1,4 +1,5 @@
 """Test the histogram workspace saving"""
+
 # pylint: disable=too-many-lines
 import os
 import ast

tests/models/test_load.py

@@ -1,4 +1,5 @@
 """Tests for the file loading part of the HistogramModel"""
+
 import time
 import os
 from mantid.simpleapi import (  # pylint: disable=no-name-in-module

tests/models/test_makeslice.py

@@ -1,4 +1,5 @@
 """Tests for the MakeSlice algorithm"""
+
 import os
 from pytest import approx
 import numpy as np

tests/models/test_makeslices.py

@@ -1,4 +1,5 @@
 """Tests for the MakeSlice algorithm"""
+
 import os
 from pytest import raises, approx
 import numpy as np

tests/models/test_plot_display_name.py

@@ -1,4 +1,5 @@
 """Tests for the plot title creation part of the HistogramModel"""
+
 # pylint: disable=no-name-in-module
 from mantid.simpleapi import (
     mtd,

tests/models/test_sample_parameters_buttons_actions.py

@@ -1,4 +1,5 @@
 """tests for Sample Parameters dialog: button actions"""
+
 import os
 
 # pylint: disable=no-name-in-module

tests/models/test_sample_parameters_invalid_inputs.py

@@ -1,4 +1,5 @@
 """tests for Sample Parameters dialog: inputs"""
+
 import os
 
 # pylint: disable=no-name-in-module

tests/models/test_show_version.py

@@ -1,4 +1,5 @@
 """Tests for printing the version"""
+
 import sys
 from pytest import raises
 from shiver.shiver import gui

tests/models/test_symmetry_operations.py

@@ -1,4 +1,5 @@
 """Tests for the file loading part of the HistogramModel"""
+
 from shiver.models.histogram import HistogramModel
 
 

tests/models/test_utils.py

@@ -1,4 +1,5 @@
 """Tests for shiver.models.utils"""
+
 from shiver.models.utils import flatten_list
 
 

tests/views/test_advanced_options_inputs.py

@@ -1,4 +1,5 @@
 """UI tests for Reduction Parameters widget: input values"""
+
 import re
 from functools import partial
 from qtpy import QtCore

tests/views/test_correction.py

@@ -1,4 +1,5 @@
 """UI tests for the corrections table"""
+
 # pylint: disable=no-name-in-module
 import os
 import re

tests/views/test_dimensions.py

@@ -1,4 +1,5 @@
 """UI tests for HistogramParameter button"""
+
 import re
 from qtpy import QtCore
 

tests/views/test_generate.py

@@ -1,4 +1,5 @@
 """Test the generate view."""
+
 import re
 import os
 from qtpy import QtCore

tests/views/test_histogram.py

@@ -1,4 +1,5 @@
 """UI test for the histogram tab"""
+
 import os
 from functools import partial
 import pytest

tests/views/test_loading_buttons.py

@@ -1,4 +1,5 @@
 """UI tests for LoadingButtons widget"""
+
 import functools
 from qtpy import QtCore, QtWidgets
 from shiver.views.loading_buttons import LoadingButtons

tests/views/test_mainwindow.py

@@ -1,4 +1,5 @@
 """UI tests for the application"""
+
 from shiver import Shiver, __version__
 
 

tests/views/test_mde_workspaces.py

@@ -1,4 +1,5 @@
 """UI tests for the MDE list tables"""
+
 import os
 from functools import partial
 from qtpy.QtWidgets import QMenu, QInputDialog, QFileDialog, QLineEdit

tests/views/test_mdh_workspaces.py

@@ -1,4 +1,5 @@
 """UI tests for the MDH list tables"""
+
 from functools import partial
 import pytest
 from qtpy.QtWidgets import QApplication, QMenu, QFileDialog, QLineEdit

tests/views/test_minimize_background.py

@@ -1,4 +1,5 @@
 """Test for the BackgroundMinimization widget"""
+
 import os
 import re
 from qtpy import QtCore, QtWidgets

tests/views/test_polarized_options.py

@@ -1,4 +1,5 @@
 """UI tests for Reduction Parameters widget: input values"""
+
 from functools import partial
 from qtpy import QtCore
 

tests/views/test_projections.py

@@ -1,4 +1,5 @@
 """UI tests for HistogramParameter button"""
+
 import re
 from shiver.views.histogram import HistogramParameter
 

tests/views/test_reduction_parameters_inputs.py

@@ -1,4 +1,5 @@
 """UI tests for Reduction Parameters widget: input values"""
+
 import os
 import re
 from functools import partial

tests/views/test_refine_ub_ui.py

@@ -1,4 +1,5 @@
 """UI test for Refine UB widget"""
+
 import pytest
 from qtpy import QtCore
 from mantid.simpleapi import (  # pylint: disable=no-name-in-module