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Error while running nf file with docker image. #17

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srinkadatta opened this issue Dec 2, 2022 · 0 comments
Open

Error while running nf file with docker image. #17

srinkadatta opened this issue Dec 2, 2022 · 0 comments

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@srinkadatta
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Command
./nextflow run rna_script.nf -with-docker a40008e6257f

Error
Error executing process > 'buildIndex (1)'

Caused by:
Process buildIndex (1) terminated with an error exit status (127)

Command executed:

bowtie2-build /home/srinka/VirTect2/human_reference/GRCh37.primary_assembly.genome.fa genome.index

Command exit status:
127

Command output:
(empty)

Command error:
.command.sh: line 2: bowtie2-build: command not found

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