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Merge pull request #54 from hyphaltip/patch-3
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change in conda install cmd
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nextgenusfs authored Jun 5, 2019
2 parents 44d728a + e8685e2 commit b8eb31d
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions docs/index.rst
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Expand Up @@ -48,7 +48,7 @@ There are several ways to install AMPtk, the easiest and recommended way is with
#UPDATE 2/9/2019: Conda solver seems to hang, if taking forever try this
conda create -n amptk
conda create -n amptk bioconductor-dada2 bioconductor-phyloseq biom-format \
conda install -n amptk bioconductor-dada2 bioconductor-phyloseq biom-format \
biopython matplotlib natsort numpy pandas pigz psutil python-edlib r-base r-dt \
r-htmltools r-plotly seaborn vsearch
conda activate amptk
Expand Down Expand Up @@ -187,4 +187,4 @@ More Information
* :ref:`AMPtk Clustering <clustering>` - overview of clustering/denoising algorithms in AMPtk
* :ref:`AMPtk OTU Table Filtering <filtering>` - OTU table filtering based on Mock community
* :ref:`AMPtk Taxonomy <taxonomy>` - assigning taxonomy in AMPtk
* :ref:`AMPtk all commands <commands>` - all commands in AMPtk
* :ref:`AMPtk all commands <commands>` - all commands in AMPtk

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