From e8685e2781ff266fe4322681f70604532c2760e3 Mon Sep 17 00:00:00 2001 From: Jason Stajich Date: Tue, 4 Jun 2019 15:47:23 -0700 Subject: [PATCH] change in conda install cmd need to use install not create in example --- docs/index.rst | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/index.rst b/docs/index.rst index b8db244..8ce2f17 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -48,7 +48,7 @@ There are several ways to install AMPtk, the easiest and recommended way is with #UPDATE 2/9/2019: Conda solver seems to hang, if taking forever try this conda create -n amptk - conda create -n amptk bioconductor-dada2 bioconductor-phyloseq biom-format \ + conda install -n amptk bioconductor-dada2 bioconductor-phyloseq biom-format \ biopython matplotlib natsort numpy pandas pigz psutil python-edlib r-base r-dt \ r-htmltools r-plotly seaborn vsearch conda activate amptk @@ -187,4 +187,4 @@ More Information * :ref:`AMPtk Clustering ` - overview of clustering/denoising algorithms in AMPtk * :ref:`AMPtk OTU Table Filtering ` - OTU table filtering based on Mock community * :ref:`AMPtk Taxonomy ` - assigning taxonomy in AMPtk -* :ref:`AMPtk all commands ` - all commands in AMPtk \ No newline at end of file +* :ref:`AMPtk all commands ` - all commands in AMPtk