Skip to content

Commit

Permalink
chore: release 2024-11-05--09-19-52Z
Browse files Browse the repository at this point in the history
Updated datasets:

- Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/CY121680)
- Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/MW626062)
- Influenza A H1N1pdm NA (nextstrain/flu/h1n1pdm/na/MW626056)
- Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/CY163680)
- Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/EPI1857216)
- Influenza A H3N2 NA (nextstrain/flu/h3n2/na/EPI1857215)
- Influenza B Victoria HA (nextstrain/flu/vic/ha/KX058884)
- Influenza B Victoria NA (nextstrain/flu/vic/na/CY073894)
- Yellow fever virus (YFV) prM-E region (nextstrain/yellow-fever/prM-E)
- Orthomarburgvirus marburgense (community/genspectrum/marburg/HK1980/all-lineages)
  • Loading branch information
nextstrain-bot committed Nov 5, 2024
1 parent a140238 commit 4a5dc35
Show file tree
Hide file tree
Showing 92 changed files with 83 additions and 53 deletions.
Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
## Unreleased
## 2024-11-05T09:19:52Z

First release of Marburg virus dataset.
First release of Marburg virus dataset.
2 changes: 1 addition & 1 deletion data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
2 changes: 1 addition & 1 deletion data/nextstrain/yellow-fever/prM-E/CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
## Unreleased
## 2024-11-05T09:19:52Z

Initial release of yellow fever virus (prM-E region only) dataset.
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
## 2024-11-05T09:19:52Z

First release of Marburg virus dataset.
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -66,6 +66,7 @@
"nucMutLabelMap": {}
},
"version": {
"tag": "unreleased"
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z"
}
}

This file was deleted.

60 changes: 40 additions & 20 deletions data_output/index.json
Original file line number Diff line number Diff line change
Expand Up @@ -819,7 +819,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -851,7 +852,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -922,7 +924,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -954,7 +957,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1022,7 +1026,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1054,7 +1059,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1123,7 +1129,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1163,7 +1170,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1235,7 +1243,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1283,7 +1292,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1351,7 +1361,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand All @@ -1375,7 +1386,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1445,7 +1457,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1477,7 +1490,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -1545,7 +1559,8 @@
},
"versions": [
{
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand All @@ -1569,7 +1584,8 @@
}
],
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down Expand Up @@ -3048,11 +3064,13 @@
},
"versions": [
{
"tag": "unreleased"
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z"
}
],
"version": {
"tag": "unreleased"
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z"
}
}
]
Expand Down Expand Up @@ -3573,11 +3591,13 @@
},
"versions": [
{
"tag": "unreleased"
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z"
}
],
"version": {
"tag": "unreleased"
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z"
}
}
]
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -117,7 +117,8 @@
"reference name": "A/California/7/2009-egg"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -119,7 +119,8 @@
"reference name": "A/Wisconsin/588/2019"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -113,7 +113,8 @@
"reference name": "A/Wisconsin/588/2019"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -117,7 +117,8 @@
"reference name": "A/Wisconsin/67/2005-egg"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees
- include subclade proposals
Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -165,7 +165,8 @@
"reference name": "A/Darwin/6/2021"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -113,7 +113,8 @@
"reference name": "A/Darwin/6/2021"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -119,7 +119,8 @@
"reference name": "B/Brisbane/60/2008-egg"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
## Unreleased
## 2024-11-05T09:19:52Z

- update reference trees

Expand Down
Binary file not shown.
Original file line number Diff line number Diff line change
Expand Up @@ -113,7 +113,8 @@
"reference name": "B/Brisbane/60/2008"
},
"version": {
"tag": "unreleased",
"updatedAt": "2024-11-05T09:19:52Z",
"tag": "2024-11-05--09-19-52Z",
"compatibility": {
"cli": "3.0.0-alpha.0",
"web": "3.0.0-alpha.0"
Expand Down
Loading

0 comments on commit 4a5dc35

Please sign in to comment.