From 4a5dc354ed1c5990a8f4990e9fb5f759dd68b848 Mon Sep 17 00:00:00 2001 From: nextstrain-bot Date: Tue, 5 Nov 2024 09:19:58 +0000 Subject: [PATCH] chore: release 2024-11-05--09-19-52Z Updated datasets: - Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/CY121680) - Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/MW626062) - Influenza A H1N1pdm NA (nextstrain/flu/h1n1pdm/na/MW626056) - Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/CY163680) - Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/EPI1857216) - Influenza A H3N2 NA (nextstrain/flu/h3n2/na/EPI1857215) - Influenza B Victoria HA (nextstrain/flu/vic/ha/KX058884) - Influenza B Victoria NA (nextstrain/flu/vic/na/CY073894) - Yellow fever virus (YFV) prM-E region (nextstrain/yellow-fever/prM-E) - Orthomarburgvirus marburgense (community/genspectrum/marburg/HK1980/all-lineages) --- .../marburg/HK1980/all-lineages/CHANGELOG.md | 4 +- .../flu/h1n1pdm/ha/CY121680/CHANGELOG.md | 2 +- .../flu/h1n1pdm/ha/MW626062/CHANGELOG.md | 2 +- .../flu/h1n1pdm/na/MW626056/CHANGELOG.md | 2 +- .../flu/h3n2/ha/CY163680/CHANGELOG.md | 2 +- .../flu/h3n2/ha/EPI1857216/CHANGELOG.md | 2 +- .../flu/h3n2/na/EPI1857215/CHANGELOG.md | 2 +- .../flu/vic/ha/KX058884/CHANGELOG.md | 2 +- .../flu/vic/na/CY073894/CHANGELOG.md | 2 +- .../yellow-fever/prM-E/CHANGELOG.md | 2 +- .../2024-11-05--09-19-52Z/CHANGELOG.md | 3 + .../README.md | 0 .../dataset.zip | Bin 2592656 -> 2592719 bytes .../examples.fasta | 0 .../genome_annotation.gff3 | 0 .../marburg_tree.json | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../all-lineages/unreleased/CHANGELOG.md | 3 - data_output/index.json | 60 ++++++++++++------ .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 1188926 -> 1188988 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 1182612 -> 1182674 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 1234364 -> 1234426 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 1400346 -> 1400408 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 1489101 -> 1489163 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 938830 -> 938892 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 1328040 -> 1328102 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 1192134 -> 1192196 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 .../CHANGELOG.md | 2 +- .../README.md | 0 .../dataset.zip | Bin 773730 -> 773792 bytes .../genome_annotation.gff3 | 0 .../pathogen.json | 3 +- .../reference.fasta | 0 .../sequences.fasta | 0 .../tree.json | 0 92 files changed, 83 insertions(+), 53 deletions(-) create mode 100644 data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/CHANGELOG.md rename data_output/community/genspectrum/marburg/HK1980/all-lineages/{unreleased => 2024-11-05--09-19-52Z}/README.md (100%) rename data_output/community/genspectrum/marburg/HK1980/all-lineages/{unreleased => 2024-11-05--09-19-52Z}/dataset.zip (99%) rename 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data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/CHANGELOG.md (73%) rename data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/README.md (100%) rename data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/dataset.zip (99%) rename data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/genome_annotation.gff3 (100%) rename data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/pathogen.json (93%) rename data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/reference.fasta (100%) rename data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/sequences.fasta (100%) rename data_output/nextstrain/yellow-fever/prM-E/{unreleased => 2024-11-05--09-19-52Z}/tree.json (100%) diff --git a/data/community/genspectrum/marburg/HK1980/all-lineages/CHANGELOG.md b/data/community/genspectrum/marburg/HK1980/all-lineages/CHANGELOG.md index 1694785f..9a205684 100644 --- a/data/community/genspectrum/marburg/HK1980/all-lineages/CHANGELOG.md +++ b/data/community/genspectrum/marburg/HK1980/all-lineages/CHANGELOG.md @@ -1,3 +1,3 @@ -## Unreleased +## 2024-11-05T09:19:52Z -First release of Marburg virus dataset. \ No newline at end of file +First release of Marburg virus dataset. diff --git a/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md b/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md index 53706165..076306db 100644 --- a/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md +++ b/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees - include subclade proposals diff --git a/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md b/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md index f57a6979..ef741a1b 100644 --- a/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md +++ b/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees - include subclade proposals diff --git a/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md b/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md index 3cf22ce3..33a7f502 100644 --- a/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md +++ b/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees diff --git a/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md b/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md index 5e8a14fd..d31d4875 100644 --- a/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md +++ b/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees - include subclade proposals diff --git a/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md b/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md index e5d4ed1b..25d41ee8 100644 --- a/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md +++ b/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees - include subclade proposals diff --git a/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md b/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md index a21e6779..e5d8f41f 100644 --- a/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md +++ b/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees diff --git a/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md b/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md index 600df5a6..8bea9f13 100644 --- a/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md +++ b/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees diff --git a/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md b/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md index 991a836e..aa281eff 100644 --- a/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md +++ b/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees diff --git a/data/nextstrain/yellow-fever/prM-E/CHANGELOG.md b/data/nextstrain/yellow-fever/prM-E/CHANGELOG.md index eb625954..6eacd81a 100644 --- a/data/nextstrain/yellow-fever/prM-E/CHANGELOG.md +++ b/data/nextstrain/yellow-fever/prM-E/CHANGELOG.md @@ -1,3 +1,3 @@ -## Unreleased +## 2024-11-05T09:19:52Z Initial release of yellow fever virus (prM-E region only) dataset. diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/CHANGELOG.md b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/CHANGELOG.md new file mode 100644 index 00000000..9a205684 --- /dev/null +++ b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/CHANGELOG.md @@ -0,0 +1,3 @@ +## 2024-11-05T09:19:52Z + +First release of Marburg virus dataset. diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/README.md b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/README.md rename to data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/README.md diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/dataset.zip b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/dataset.zip similarity index 99% rename from data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/dataset.zip rename to 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a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/examples.fasta b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/examples.fasta similarity index 100% rename from data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/examples.fasta rename to data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/examples.fasta diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/genome_annotation.gff3 b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/genome_annotation.gff3 similarity index 100% rename from data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/genome_annotation.gff3 rename to data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/genome_annotation.gff3 diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/marburg_tree.json b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/marburg_tree.json similarity index 100% rename from data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/marburg_tree.json rename to data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/marburg_tree.json diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/pathogen.json b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/pathogen.json similarity index 95% rename from data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/pathogen.json rename to data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/pathogen.json index f0a5968e..765be982 100644 --- a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/pathogen.json +++ b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/pathogen.json @@ -66,6 +66,7 @@ "nucMutLabelMap": {} }, "version": { - "tag": "unreleased" + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z" } } diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/reference.fasta b/data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/reference.fasta similarity index 100% rename from data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/reference.fasta rename to data_output/community/genspectrum/marburg/HK1980/all-lineages/2024-11-05--09-19-52Z/reference.fasta diff --git a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/CHANGELOG.md b/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/CHANGELOG.md deleted file mode 100644 index 1694785f..00000000 --- a/data_output/community/genspectrum/marburg/HK1980/all-lineages/unreleased/CHANGELOG.md +++ /dev/null @@ -1,3 +0,0 @@ -## Unreleased - -First release of Marburg virus dataset. \ No newline at end of file diff --git a/data_output/index.json b/data_output/index.json index 0b157518..c0831cf9 100644 --- a/data_output/index.json +++ b/data_output/index.json @@ -819,7 +819,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -851,7 +852,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -922,7 +924,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -954,7 +957,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1022,7 +1026,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1054,7 +1059,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1123,7 +1129,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1163,7 +1170,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1235,7 +1243,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1283,7 +1292,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1351,7 +1361,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1375,7 +1386,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1445,7 +1457,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1477,7 +1490,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1545,7 +1559,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1569,7 +1584,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -3048,11 +3064,13 @@ }, "versions": [ { - "tag": "unreleased" + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z" } ], "version": { - "tag": "unreleased" + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z" } } ] @@ -3573,11 +3591,13 @@ }, "versions": [ { - "tag": "unreleased" + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z" } ], "version": { - "tag": "unreleased" + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z" } } ] diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/CHANGELOG.md index 53706165..076306db 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees - include subclade proposals diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/README.md b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/README.md rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/README.md diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/dataset.zip b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/dataset.zip rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/dataset.zip index 22a937ef2c1c99682be3d99b7c4fceeab41a8b50..9f3c779330b0339d95f29e510b1410f05d89a064 100644 GIT binary patch delta 335 zcmdmY!sE{g561v+W)=|!2vB6mOscZE&d$I9!aP7hXAeg|cUK>OcfH&cWn~2;10xe% zLqlBy(+~qoD?>{wQ=_Pj=Ff$=UhjYMiiMkjfrWdshHxR5YiU7BVo7R>V~LWLf)X}e zN;+H$K%i8Tn2xGMSJ%K&*U(ZIXmax^+4fbkj6lo;#LPg<0>rF9%m&2lK+FNeoIuP4 z#N0s41H`;Q%m>8$Kr8^ng4cSYZhs*w^p=Ga?zrjql!UyQzOzr) zRu(d4WS*X=ETk!oa0~+jFVsUIY6+vj^rgx|R*c-!A1DjiFcwXhRRL0Krbnp=$*{F6 I2?5mr04GFI$p8QV diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/genome_annotation.gff3 b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/pathogen.json b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/pathogen.json similarity index 97% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/pathogen.json rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/pathogen.json index 3063dca1..0c1a90d8 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/pathogen.json @@ -117,7 +117,8 @@ "reference name": "A/California/7/2009-egg" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/reference.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/reference.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/reference.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/sequences.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/sequences.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/sequences.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/tree.json b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/tree.json rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-11-05--09-19-52Z/tree.json diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/CHANGELOG.md index f57a6979..ef741a1b 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees - include subclade proposals diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/README.md b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/README.md rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/README.md diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/dataset.zip b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/dataset.zip rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/dataset.zip index 4d98251903fcfeecb414bb8719ffa8f7e72e4650..134a572397c466fa0b92747e0203131bc2036cba 100644 GIT binary patch delta 365 zcmbO--Q&`9561v+W)=|!2vB73oA<*zgPnl^gn591&K{0_?yf%m?s~Z?%E}5x21X{j zhK9NZrXdEFR)&^Vrbba4%^wPK{;!IfW6jOLV7*yUXeF0xX+cV2NotB?iISCq5;jdr 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97% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/pathogen.json rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/pathogen.json index b8379077..4c057d68 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/pathogen.json @@ -119,7 +119,8 @@ "reference name": "A/Wisconsin/588/2019" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/reference.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/reference.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/reference.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/sequences.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/sequences.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/sequences.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/tree.json b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/tree.json rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-11-05--09-19-52Z/tree.json diff --git a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-11-05--09-19-52Z/CHANGELOG.md similarity index 97% rename from data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-11-05--09-19-52Z/CHANGELOG.md index 3cf22ce3..33a7f502 100644 --- a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-11-05--09-19-52Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees diff --git a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/README.md b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/README.md rename to data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-11-05--09-19-52Z/README.md diff --git a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/dataset.zip b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-11-05--09-19-52Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/dataset.zip rename to data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-11-05--09-19-52Z/dataset.zip index 178523af16a1d34225ca125c5e099882a13c51e3..ccee8ed478f31a77a6f454f7dc43e3ad0e07855e 100644 GIT binary patch delta 330 zcmdn9+WXgPZ^r;{W)=|!2vB5rv3%CNWh@K~Aj|_4boOxcb9eRech}2JQC3zkGB7gH zH8j*UFby%Vv@*1`GBt|YX#QA;^W33Twr98)7|v`~7PjJYEiFh%EJ;mqEK#yjP{O83 zNry`T2$V_^(@~Y^>Ka(;8d~ZC4Q|epZO@Zs1Y#y2W(HywAZ7((HXvpPVh$kY1Y#~A z<_2OOAm#;PJ|N}?VgVo)+@2>Zw0s*U+-K9}t_XQEUYMSBMaYaXWctD@LYmTW=L5aK v3k?hqwS-Y@`qL{yR!qEd(-p4@Su=)BkG(2n!zAT8efCu$X*TC8LO@jjr&?M5 delta 268 zcmeyh+I!DxZ}R|eW)=|!2vB60xTQ3D4hsVV2=f31ojn}=++BVA-Su))l$8}i^NLb) zQWJ|)Q#Lw27UFbmxz{&?i-BRrW?f+`F2Rz-bR{bVrBb+}<~6eIYh)RLmvn1&cwS{YhenHoiHG`}IhIZu`4)o(5ahToed1T(o@OAAsGOHxxDOO&h>l(1=1 z(&1770;Q6~bW|m}x(1fIhL*ZOgPSKww@;F01Y#y2W(HywAZ7((HXvpPVh$kY1Y#~A z<_2OOAm#;PJ|N}?VgVo)1Y#i|76xLG?USTMA3AWteL1}*M%0_}&-4>9qGpW$rvHx- z)s%*N1?U}KXuyD|C5+tDonu9nlDJVUyx=5VkRJF24WT< zW(8t4AZ7<*4j|?PVlE)&24Wr{<^^ItAm#^R0U#CxVj&Iek}* 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b/data_output/nextstrain/flu/h3n2/ha/CY163680/2024-11-05--09-19-52Z/pathogen.json @@ -117,7 +117,8 @@ "reference name": "A/Wisconsin/67/2005-egg" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h3n2/ha/CY163680/unreleased/reference.fasta b/data_output/nextstrain/flu/h3n2/ha/CY163680/2024-11-05--09-19-52Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/h3n2/ha/CY163680/unreleased/reference.fasta rename to data_output/nextstrain/flu/h3n2/ha/CY163680/2024-11-05--09-19-52Z/reference.fasta diff --git a/data_output/nextstrain/flu/h3n2/ha/CY163680/unreleased/sequences.fasta b/data_output/nextstrain/flu/h3n2/ha/CY163680/2024-11-05--09-19-52Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/h3n2/ha/CY163680/unreleased/sequences.fasta rename to data_output/nextstrain/flu/h3n2/ha/CY163680/2024-11-05--09-19-52Z/sequences.fasta diff --git a/data_output/nextstrain/flu/h3n2/ha/CY163680/unreleased/tree.json b/data_output/nextstrain/flu/h3n2/ha/CY163680/2024-11-05--09-19-52Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/h3n2/ha/CY163680/unreleased/tree.json rename to data_output/nextstrain/flu/h3n2/ha/CY163680/2024-11-05--09-19-52Z/tree.json diff --git a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/CHANGELOG.md index e5d4ed1b..25d41ee8 100644 --- a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees - include subclade proposals diff --git a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/README.md b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/README.md rename to data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/README.md diff --git a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/dataset.zip b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/dataset.zip rename to data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/dataset.zip index 0f8c053b29bdb3a10f63d7eb5b4c78481e61de75..3ac69e3cae92c47d17574fcfe8423ccbffdc963a 100644 GIT binary patch delta 346 zcmX^6F{=Ahlw*K5Gm8iV1Sm4RJf--gf{lRzgn591&K{0_?yf%m?s~Z?%E}5x21X{j 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b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/pathogen.json similarity index 98% rename from data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/pathogen.json rename to data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/pathogen.json index 6a442760..e5a39af1 100644 --- a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/pathogen.json @@ -165,7 +165,8 @@ "reference name": "A/Darwin/6/2021" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/reference.fasta b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/reference.fasta rename to data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/reference.fasta diff --git a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/sequences.fasta b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/sequences.fasta rename to data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/sequences.fasta diff --git a/data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/tree.json b/data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/h3n2/ha/EPI1857216/unreleased/tree.json rename to data_output/nextstrain/flu/h3n2/ha/EPI1857216/2024-11-05--09-19-52Z/tree.json diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-11-05--09-19-52Z/CHANGELOG.md similarity index 96% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-11-05--09-19-52Z/CHANGELOG.md index a21e6779..e5d8f41f 100644 --- a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-11-05--09-19-52Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/README.md b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/README.md rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-11-05--09-19-52Z/README.md diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/dataset.zip b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-11-05--09-19-52Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/dataset.zip rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-11-05--09-19-52Z/dataset.zip index 8b662cad5097f1d63b54cea862e1b6ae359d20bc..529bbe88d5272c1c9bc4de05925b44c34691061c 100644 GIT binary patch delta 314 zcmX@N%(7>>rDK3MGm8iV1Sm56-LAW0G7|#>2=f31ojn}=++BVA-Su))l$8~X42(>4 z4Gnb-OhXJTtqd)#OpT&8noDwXE-YhSyn~B@VaMi3ZZ$5~(t?!4lGGH(5+y4IC2X3M zbhs3NK&d1#9aV|0u7Rblp`|X+;N}UU?Gr>9ftU%1nSq!Eh*^P{4T#x+m;;D8ftU-3 zxq+Amhjd-3uw4!01F8Z5R|rp| delta 252 zcmeBKZh3B*rFnoiGm8iV1Sm2rNDw{W$;7|_!aP7hXAeg|cUK>OcfH&cWo3oXyrR^c z)WqV{l#Py(+?-C)C0|>(7#LbMCv&TD36>OAAsGOHxxDOO&h>l(6Yi z(&1770;Q6~bW|m}x(1fIhL*ZOlbcsdwXc?91Y#y2W(HywAZ7((HXvpPVh$kY1Y#~A z<_2OOAm#;PJ|N}?VgVo)1Y#i|7T&&EN+e936Yj<7Tuvh1j4P&xIfWfkY=1$eWvfz+}C O;X+0R27M<`xB>tH!&yrJ delta 331 zcmaFX9=M`C&^*AKnMH&F0u&iImbF=wure@!Fb`1B*~8J#-POn6T`xC9Sy>@8uP8Mq zHL*A~WuxN(ey$wlC80mK7#MzVZRQr3$t75ln66}{pi~N1)%;Sb{iPHm5HkTWGZ3=? 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a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/vic/ha/KX058884/2024-11-05--09-19-52Z/pathogen.json @@ -119,7 +119,8 @@ "reference name": "B/Brisbane/60/2008-egg" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/reference.fasta b/data_output/nextstrain/flu/vic/ha/KX058884/2024-11-05--09-19-52Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/vic/ha/KX058884/unreleased/reference.fasta rename to data_output/nextstrain/flu/vic/ha/KX058884/2024-11-05--09-19-52Z/reference.fasta diff --git a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/sequences.fasta b/data_output/nextstrain/flu/vic/ha/KX058884/2024-11-05--09-19-52Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/vic/ha/KX058884/unreleased/sequences.fasta rename to data_output/nextstrain/flu/vic/ha/KX058884/2024-11-05--09-19-52Z/sequences.fasta diff --git a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/tree.json b/data_output/nextstrain/flu/vic/ha/KX058884/2024-11-05--09-19-52Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/vic/ha/KX058884/unreleased/tree.json rename to data_output/nextstrain/flu/vic/ha/KX058884/2024-11-05--09-19-52Z/tree.json diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/CHANGELOG.md similarity index 97% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/CHANGELOG.md index 991a836e..aa281eff 100644 --- a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-11-05T09:19:52Z - update reference trees diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/README.md b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/README.md rename to data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/README.md diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/dataset.zip b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/dataset.zip rename to data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/dataset.zip index 364c91f5e49ec38588c19c379b0d2ca2ea62267d..8f11181de0f0b66d4dcc3c461921943bc33d4de4 100644 GIT binary patch delta 350 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a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/pathogen.json b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/pathogen.json similarity index 97% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/pathogen.json rename to data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/pathogen.json index 19d4585e..27b43a58 100644 --- a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/pathogen.json @@ -113,7 +113,8 @@ "reference name": "B/Brisbane/60/2008" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-11-05T09:19:52Z", + "tag": "2024-11-05--09-19-52Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/reference.fasta b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/reference.fasta rename to data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/reference.fasta diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/sequences.fasta b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/sequences.fasta rename to data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/sequences.fasta diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/tree.json b/data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/tree.json rename to data_output/nextstrain/flu/vic/na/CY073894/2024-11-05--09-19-52Z/tree.json diff --git a/data_output/nextstrain/yellow-fever/prM-E/unreleased/CHANGELOG.md b/data_output/nextstrain/yellow-fever/prM-E/2024-11-05--09-19-52Z/CHANGELOG.md similarity index 73% rename from data_output/nextstrain/yellow-fever/prM-E/unreleased/CHANGELOG.md rename to data_output/nextstrain/yellow-fever/prM-E/2024-11-05--09-19-52Z/CHANGELOG.md index eb625954..6eacd81a 100644 --- a/data_output/nextstrain/yellow-fever/prM-E/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/yellow-fever/prM-E/2024-11-05--09-19-52Z/CHANGELOG.md @@ -1,3 +1,3 @@ -## Unreleased +## 2024-11-05T09:19:52Z Initial release of yellow fever virus (prM-E region only) dataset. diff --git a/data_output/nextstrain/yellow-fever/prM-E/unreleased/README.md b/data_output/nextstrain/yellow-fever/prM-E/2024-11-05--09-19-52Z/README.md similarity index 100% rename from data_output/nextstrain/yellow-fever/prM-E/unreleased/README.md rename to data_output/nextstrain/yellow-fever/prM-E/2024-11-05--09-19-52Z/README.md diff --git a/data_output/nextstrain/yellow-fever/prM-E/unreleased/dataset.zip 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