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Merge pull request #181 from nextstrain/add-emerging-clades
CI #594: Commit 2489228 pushed by huddlej
September 16, 2024 21:28 32m 49s master
September 16, 2024 21:28 32m 49s
Add emerging subclades to nextflu-private builds
CI #593: Pull request #181 synchronize by huddlej
September 16, 2024 18:27 2m 14s add-emerging-clades
September 16, 2024 18:27 2m 14s
github_actions in /. - Update #885356242
Dependabot Updates #9: by dependabot bot
September 16, 2024 13:39 39s
September 16, 2024 13:39 39s
Add emerging subclades to nextflu-private builds
CI #592: Pull request #181 synchronize by huddlej
September 14, 2024 15:27 2m 16s add-emerging-clades
September 14, 2024 15:27 2m 16s
Add emerging subclades to nextflu-private builds
CI #591: Pull request #181 synchronize by huddlej
September 14, 2024 00:02 2m 11s add-emerging-clades
September 14, 2024 00:02 2m 11s
Refine titer figures
CI #590: Commit bddf3d1 pushed by huddlej
September 13, 2024 22:19 2m 14s master
September 13, 2024 22:19 2m 14s
Update references for titer plots
CI #589: Commit 981a508 pushed by huddlej
September 13, 2024 21:43 2m 6s master
September 13, 2024 21:43 2m 6s
Deploy private.nextflu.org
Deploy private.nextflu.org #70: Manually run by joverlee521
September 12, 2024 23:49 3m 44s master
September 12, 2024 23:49 3m 44s
Run Nextstrain builds for the nextflu-private group
Run Nextstrain builds for the nextflu-private group #44: Manually run by github-actions bot
September 12, 2024 18:31 1h 4m 38s master
September 12, 2024 18:31 1h 4m 38s
Run Nextclade on all sequences
Run Nextclade on all sequences #27: Manually run by github-actions bot
September 12, 2024 18:31 8m 22s master
September 12, 2024 18:31 8m 22s
Run the Nextstrain public builds
Run the Nextstrain public builds #125: Manually run by github-actions bot
September 12, 2024 18:31 1h 31m 47s master
September 12, 2024 18:31 1h 31m 47s
Run the private Nextflu builds
Run the private Nextflu builds #95: Manually run by github-actions bot
September 12, 2024 18:31 5h 7m 27s master
September 12, 2024 18:31 5h 7m 27s
Upload data from fauna to S3
Upload data from fauna to S3 #125: Manually run by joverlee521
September 12, 2024 17:47 44m 57s master
September 12, 2024 17:47 44m 57s
Don't annotate titer node data unless using titer models
CI #588: Commit de6a7ef pushed by huddlej
September 11, 2024 22:50 2m 8s master
September 11, 2024 22:50 2m 8s
Support derived haplotypes at a subset of sites
CI #587: Commit 7bceaa9 pushed by huddlej
September 11, 2024 22:50 2m 13s master
September 11, 2024 22:50 2m 13s
Fix RBD numbering in Nextclade pathogen JSON
CI #586: Commit 78cdcb7 pushed by huddlej
September 11, 2024 22:48 2m 8s master
September 11, 2024 22:48 2m 8s
Add emerging subclades to nextflu-private builds
CI #585: Pull request #181 synchronize by huddlej
September 11, 2024 20:47 2m 17s add-emerging-clades
September 11, 2024 20:47 2m 17s
Add emerging subclades to nextflu-private builds
CI #584: Pull request #181 opened by huddlej
September 11, 2024 01:53 2m 9s add-emerging-clades
September 11, 2024 01:53 2m 9s
Use gisaid_epi_isl in workflows
CI #583: Pull request #180 opened by joverlee521
September 10, 2024 21:39 2m 11s use-gisaid-epi-isl
September 10, 2024 21:39 2m 11s
Rename metadata column from isolate_id to gisaid_epi_isl
CI #582: Pull request #179 opened by joverlee521
September 10, 2024 21:35 2m 11s upload-gisaid-epi-isl
September 10, 2024 21:35 2m 11s
github_actions in /. - Update #881243162
Dependabot Updates #8: by dependabot bot
September 9, 2024 13:30 35s
September 9, 2024 13:30 35s
Deploy private.nextflu.org
Deploy private.nextflu.org #69: Manually run by joverlee521
September 6, 2024 00:23 2m 50s master
September 6, 2024 00:23 2m 50s
Run the private Nextflu builds
Run the private Nextflu builds #94: Manually run by github-actions bot
September 5, 2024 18:46 5h 7m 29s master
September 5, 2024 18:46 5h 7m 29s
Run Nextclade on all sequences
Run Nextclade on all sequences #26: Manually run by github-actions bot
September 5, 2024 18:46 8m 56s master
September 5, 2024 18:46 8m 56s
Run the Nextstrain public builds
Run the Nextstrain public builds #124: Manually run by github-actions bot
September 5, 2024 18:46 1h 29m 24s master
September 5, 2024 18:46 1h 29m 24s