diff --git a/ingest/rules/nextclade.smk b/ingest/rules/nextclade.smk index ce7eb89..78833dc 100644 --- a/ingest/rules/nextclade.smk +++ b/ingest/rules/nextclade.smk @@ -30,9 +30,6 @@ rule run_nextclade: output: nextclade="results/nextclade.tsv", alignment="results/alignment.fasta", -# translations="results/translations.zip", - params: -# translations=lambda w: "results/translations/{cds}.fasta", log: "logs/run_nextclade.txt", benchmark: @@ -46,10 +43,6 @@ rule run_nextclade: --output-fasta {output.alignment} \ &> {log:q} """ - # --output-translations {params.translations} - - # zip -rj {output.translations} results/translations - # """ rule join_metadata_and_nextclade: