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Add module to check quality of Spades assembly #105

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logankblair opened this issue Oct 28, 2024 · 0 comments
Open

Add module to check quality of Spades assembly #105

logankblair opened this issue Oct 28, 2024 · 0 comments

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@logankblair
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With assembly now on the front end, we need a way to discard samples with low coverage or read quality. This could be done based on fast QC or some genome coverage estimate, but another convenient QC metric would be using the N50 of the Spades assembly.

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