diff --git a/nextflow.config b/nextflow.config index 24d0700..27f466f 100644 --- a/nextflow.config +++ b/nextflow.config @@ -120,13 +120,13 @@ profiles { } } - hutch_singularity { + hutch_apptainer { workDir = params.work_dir resume = true // null for no resume - singularity { + apptainer { enabled = true autoMounts = true - cacheDir = 'singularity_cache/' + cacheDir = '/fh/scratch/delete90/fredricks_d/lab/nhoffman/apptainer/cache/' } params { output = 'output'