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Referencing git hash in nextflow #5

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nkrumm opened this issue Feb 4, 2020 · 0 comments
Open

Referencing git hash in nextflow #5

nkrumm opened this issue Feb 4, 2020 · 0 comments

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@nkrumm
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nkrumm commented Feb 4, 2020

Take a look at https://www.nextflow.io/docs/latest/metadata.html

println "Git info: $workflow.repository - $workflow.revision [$workflow.commitId]"

I am not sure if those can be referenced in a config file, but at least they could be printed with workflow execution.

We can also consider having batcman slurp up these values automatically and store/display them, since they should be passed back automatically.

relevant code in dada2-nf:

dada2-nf/nextflow.config

Line 8 in 182991c

// TODO: version number should contain output of `git describe --tags --dirty`

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