These are R scripts are made to analyze scRNA Seq data using Seurat 3.1.5 and Monocle3 using the Seurat software package for https://doi.org/10.1242/dev.200167
Single_Cell_Monocle3_20210614_NM_05.R : This script is for pseudotime data analysis and generating graphs for E16 Invivo scRNA Seq using Monocle3
Single_cell_Analysis_20210216_NM_04.R : This script is for data analysis and generating graphs for E16 Invivo scRNA Seq
Single_cell_Analysis_20210916_NM_01.R : This script is for data analysis - FGF2 Invitro organoids
Single_cell_Analysis_20210927_NM_01.R : This script is for data analysis + FGF2 Invitro organoids