diff --git a/docs/src/examples/ExampleAnalysis.jl b/docs/src/examples/ExampleAnalysis.jl index f211b4c..7247545 100644 --- a/docs/src/examples/ExampleAnalysis.jl +++ b/docs/src/examples/ExampleAnalysis.jl @@ -187,4 +187,4 @@ highly variable genes that can be used for analysis. We again here demonstrate i `Muon.AnnData`. =# -adata = readstereoseqbinned(AnnData, stereoseq_file, 50) \ No newline at end of file +adata = readstereoseqbinned(AnnData, stereoseq_file, 50) diff --git a/src/GridCount.jl b/src/GridCount.jl index 2230307..e7bfc03 100644 --- a/src/GridCount.jl +++ b/src/GridCount.jl @@ -160,4 +160,4 @@ function totalrna(counts) return sparse((reduce(vcat, i) for i in (x, y, v))..., gridsize(counts)...) end -end # module GridCount \ No newline at end of file +end # module GridCount diff --git a/src/IO.jl b/src/IO.jl index f4c4b7d..fa356e8 100644 --- a/src/IO.jl +++ b/src/IO.jl @@ -70,4 +70,4 @@ function readstereoseqbinned(file, binsize::Integer) ) end -end # module IO \ No newline at end of file +end # module IO diff --git a/src/KDE.jl b/src/KDE.jl index 3732330..43a2874 100644 --- a/src/KDE.jl +++ b/src/KDE.jl @@ -231,4 +231,4 @@ function assigncelltype(counts, signatures, kernel; celltypes=nothing, log=false return celltypemap, cosine end -end # module KDE \ No newline at end of file +end # module KDE diff --git a/src/LocalMax.jl b/src/LocalMax.jl index b249cc4..6aff740 100644 --- a/src/LocalMax.jl +++ b/src/LocalMax.jl @@ -85,4 +85,4 @@ function getlocalmaxima(counts, localmax, kernel; genes=nothing) ) end -end # module LocalMax \ No newline at end of file +end # module LocalMax diff --git a/src/Utils.jl b/src/Utils.jl index 4696954..0c1234b 100644 --- a/src/Utils.jl +++ b/src/Utils.jl @@ -12,4 +12,4 @@ end stringcoordinates(x, y) = @. string(x) * "_" * string(y) stringcoordinates(x...) = [join((string(j) for j in i), "_") for i in zip(x...)] -end # module Utils \ No newline at end of file +end # module Utils diff --git a/test/kde.jl b/test/kde.jl index 64f6d77..c459451 100644 --- a/test/kde.jl +++ b/test/kde.jl @@ -58,4 +58,4 @@ end coords = map(CartesianIndex, [(1, 1), (2, 3), (2, 4)]) Sainsc.LocalMax.getkdeforcoordinates(counts, coords, kernel) == kdeatcoord -end \ No newline at end of file +end diff --git a/test/utils.jl b/test/utils.jl index df00326..ed8e3c4 100644 --- a/test/utils.jl +++ b/test/utils.jl @@ -13,4 +13,4 @@ end x, y = Int[0, 0, 1, 0, 1], Int[0, 1, 0, 0, 1] @test Sainsc.Utils.categoricalcoordinates(x, y) == ([1, 2, 3, 1, 4], ([0, 0, 1, 1], [0, 1, 0, 1])) -end \ No newline at end of file +end