From 61e7c2446975daed9a52b6e3c37fdc35b68669e2 Mon Sep 17 00:00:00 2001 From: mathiasg Date: Wed, 4 Oct 2023 11:49:15 -0400 Subject: [PATCH] STY: Fix indentations, add pep8 config --- .pep8speaks.yml | 6 ++++++ nibabies/workflows/anatomical/outputs.py | 8 ++++---- 2 files changed, 10 insertions(+), 4 deletions(-) create mode 100644 .pep8speaks.yml diff --git a/.pep8speaks.yml b/.pep8speaks.yml new file mode 100644 index 00000000..eecf4012 --- /dev/null +++ b/.pep8speaks.yml @@ -0,0 +1,6 @@ +scanner: + diff_only: True + linter: pycodestyle + +pycodestyle: + max-line-length: 100 diff --git a/nibabies/workflows/anatomical/outputs.py b/nibabies/workflows/anatomical/outputs.py index e7ceb6a6..bf62340a 100644 --- a/nibabies/workflows/anatomical/outputs.py +++ b/nibabies/workflows/anatomical/outputs.py @@ -247,7 +247,7 @@ def init_anat_reports_wf( # fmt: off workflow.connect([ (inputnode, recon_report, [('subjects_dir', 'subjects_dir'), - ('subject_id', 'subject_id')]), + ('subject_id', 'subject_id')]), (recon_report, ds_recon_report, [('out_report', 'in_file')]), (inputnode, ds_recon_report, [('source_file', 'source_file')]) ]) @@ -654,7 +654,7 @@ def init_anat_derivatives_wf( # fmt: off workflow.connect([ (inputnode, mask_anat, [(preproc_file, 'in_file'), - ('anat_mask', 'in_mask')]), + ('anat_mask', 'in_mask')]), (mask_anat, anat2std_t1w, [('out_file', 'input_image')]), (inputnode, anat2std_mask, [('anat_mask', 'input_image')]), (inputnode, anat2std_dseg, [('anat_dseg', 'input_image')]), @@ -832,9 +832,9 @@ def init_anat_derivatives_wf( (name_morphs, ds_morphs, [('hemi', 'hemi'), ('suffix', 'suffix')]), (inputnode, ds_anat_fsaseg, [('anat_fs_aseg', 'in_file'), - (source_files, 'source_file')]), + (source_files, 'source_file')]), (inputnode, ds_anat_fsparc, [('anat_fs_aparc', 'in_file'), - (source_files, 'source_file')]), + (source_files, 'source_file')]), ]) # fmt: on if cifti_output: