From d067511e220e0a4435befd68c09a3e82f893a318 Mon Sep 17 00:00:00 2001 From: Scott Huberty Date: Fri, 6 Sep 2024 08:42:25 -0700 Subject: [PATCH] TST, WIP: Make it break --- nibabies/utils/tests/test_bids.py | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/nibabies/utils/tests/test_bids.py b/nibabies/utils/tests/test_bids.py index 160421b3..44e4ad31 100644 --- a/nibabies/utils/tests/test_bids.py +++ b/nibabies/utils/tests/test_bids.py @@ -22,7 +22,7 @@ def create_sidecar(tsv_file: Path, units) -> None: age = {'age': [4, 4, 4]} age_weeks = {'age_weeks': [4, 8, 12]} age_months = {'age_months': [3, 6, 9]} -age_years = {'age_years': [1, 1, 2]} +age_years = {'age_years': [1, 2, 1, 2, 1, 2]} # Will be used for longitudinal TSV @pytest.mark.parametrize( @@ -42,7 +42,12 @@ def create_sidecar(tsv_file: Path, units) -> None: def test_get_age_from_tsv(tmp_path, idx_col, idx_val, data, sidecar, expected): tsv_file = tmp_path / 'test-age-parsing.tsv' base = {} - if idx_col is not None: + if idx_col == "participant_id" and idx_val == "x3": + # Longitudinal study TSV with both participant_id and session columns + base['participant_id'] = ["x1", "x1", "x2", "x2", "x3", "x3"] + base['session'] = ["v1", "v2", "v1", "v2", "v1", "v2"] + assert len(base['participant_id']) == len(data['age_years']) + elif idx_col is not None: base[idx_col] = ['x1', 'x2', 'x3'] create_tsv({**base, **data}, tsv_file)