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Issues: nipy/dmriprep

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Issues list

Create a hash of subject's files after downloading
#47 opened Dec 11, 2018 by richford
@richford
add shell-specific SNR and CNR images from eddy to QC report QC qc images related
#13 opened Nov 26, 2018 by akeshavan OHBM
@akeshavan
3
QA output: images you need to determine whether b vectors are oriented correctly enhancement New feature or request QC qc images related
#14 opened Nov 28, 2018 by arokem OHBM
@akeshavan
Vectors on RGB in QC QC qc images related
#16 opened Nov 28, 2018 by jyeatman OHBM
@akeshavan
Plot number of outliers per volume QC qc images related
#18 opened Nov 28, 2018 by jyeatman OHBM
@akeshavan
Need a fall-back for cases where no T1w images are available
#20 opened Nov 28, 2018 by arokem OHBM
@akeshavan
2
Centralize data collection of QA metrics QC qc images related
#21 opened Nov 28, 2018 by arokem OHBM
@akeshavan
3
Manuscript
#22 opened Nov 28, 2018 by jyeatman
@jyeatman
does the target for dmriprep allow things like brainstem and spinal cord scans?
#24 opened Dec 4, 2018 by satra
1
no topup for when there is only one phase encode
#29 opened Dec 5, 2018 by jyeatman
prepare datasets for all use cases
#30 opened Dec 5, 2018 by akeshavan
@arokem
1
Write Tests
#45 opened Dec 11, 2018 by richford OHBM
@akeshavan @richford
Add tests
#6 opened Sep 7, 2018 by richford
write a nipype interface for eddy_qc
#46 opened Dec 11, 2018 by akeshavan OHBM
@akeshavan @richford
add another postprocessing step to HBN study data -- rename AP/PA fmaps
#54 opened Dec 18, 2018 by akeshavan
@akeshavan @richford
nibabel get_data vs get_fdata
#55 opened Dec 18, 2018 by akeshavan
5
ENH: Two pipelines
#58 opened Feb 4, 2019 by richford
4
Cloudknot Freesurfer
#59 opened Feb 5, 2019 by arokem
ENH: Optional preprocessing steps for denoising, unringing and upsampling
#62 opened Feb 21, 2019 by josephmje
3
For data.Study object, maybe the s3_prefix input should default to None?
#63 opened Feb 25, 2019 by arokem
regenerate neurodocker docker file with min version of Freesurfer
#66 opened Mar 8, 2019 by akeshavan
Longitudinal pipeline
#68 opened Mar 13, 2019 by araikes
make a CLI that would run docker with the dependencies in it
#70 opened Mar 25, 2019 by arokem
@akeshavan @richford
1
End-to-end testing
#71 opened Mar 25, 2019 by arokem
dMRIprep 0.5.0: No folder output dir of dwi created
#115 opened Apr 26, 2021 by nabaruns
5
ProTip! Updated in the last three days: updated:>2025-02-28.