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First release of SLIMER
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nleguillarme committed Oct 15, 2024
1 parent 42e3327 commit 12c9776
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2 changes: 2 additions & 0 deletions SLIMER/.Rbuildignore
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^.*\.Rproj$
^\.Rproj\.user$
29 changes: 29 additions & 0 deletions SLIMER/DESCRIPTION
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Package: SLIMER
Type: Package
Title: A package to retrieve trophic information from SLIME, the semantic Soil-Life Metaweb
Version: 1.0.0
Author: Author 1 <[email protected]>
Maintainer: Author 1 <[email protected]>
Description: The SLIMER package provides functions for executing SPARQL queries and retrieving trophic information from the SLIME knowledge graph.
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
Config/Needs/website: usethis, pkgdown
RoxygenNote: 7.3.1
URL:
Imports:
stringr,
purrr,
dplyr,
httr2,
anytime,
tibble,
memoise,
rlang
Depends: R (>= 4.3)
Suggests:
knitr,
rmarkdown,
pkgdown
VignetteBuilder: knitr
BugReports:
21 changes: 21 additions & 0 deletions SLIMER/LICENSE
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MIT License

Copyright (c) 2023 Author 1, Author 2

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
24 changes: 24 additions & 0 deletions SLIMER/NAMESPACE
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# Generated by roxygen2: do not edit by hand

export(fill.query)
export(format.result.df)
export(get.diets)
export(get.guilds)
export(get.interactions)
export(get.potential.interactions)
export(get.source.metadata)
export(get.sources)
export(get.sparql.values)
export(get.trophic.groups)
export(send.sparql)
import(dplyr)
import(httr2)
import(memoise)
import(purrr)
importFrom(anytime,anytime)
importFrom(httr2,"%>%")
importFrom(rlang,abort)
importFrom(stringr,fixed)
importFrom(stringr,str_replace)
importFrom(tibble,add_column)
importFrom(tibble,tibble)
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