From 02be743d7546f25956221259ee9b270f46331d06 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Fri, 9 Jun 2023 10:53:59 -0400 Subject: [PATCH 01/13] add auto release yml (still needs updating) --- .github/workflows/release.yml | 258 ++++++++++++++++++++++++++++++++++ 1 file changed, 258 insertions(+) create mode 100644 .github/workflows/release.yml diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml new file mode 100644 index 00000000..19fc6d7f --- /dev/null +++ b/.github/workflows/release.yml @@ -0,0 +1,258 @@ +name: Release + +on: + workflow_dispatch: + +jobs: + + release: + runs-on: ubuntu-latest + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + R_REMOTES_NO_ERRORS_FROM_WARNINGS: true + RSPM: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" + + steps: + - name: Setup Git repository + uses: actions/checkout@v3 + fetch-depth: 0 + + - name: Update Ubuntu packages + run: sudo apt-get update + + - name: Setup R + uses: r-lib/actions/setup-r@v2 + with: + r-version: 'release' + + - name: Setup pandoc + uses: r-lib/actions/setup-pandoc@v2 + with: + pandoc-version: '2.14.0.3' + + - name: Install rmarkdown + run: install.packages("rmarkdown") + shell: Rscript {0} + +# Get previous version and then create the next version + - name: Application Version + id: version + uses: paulhatch/semantic-version@v5.0.2 + with: + tag_prefix: "v" + version_format: "v${major}.${minor}.${patch}" + +# Create version.txt to use when changing the version in the index.md + - name: Create version.txt + run: echo ${{ steps.version.outputs.version }} > version.txt + +# Update version and date in SS330_User_Manual.tex + - name: Update version and date in manual + run: | + version <- readLines("version.txt", encoding = "UTF-8") + version <- gsub("v", "", version) + manual_tex <- readLines("SS330_User_Manual.tex") + manual_tex[grep("Version", manual_tex)] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, manual_tex[grep("Version", manual_tex)]) + date_line <- manual_tex[grep("date[{]", manual_tex)] + todays_month <- format(Sys.Date(), "%B") + todays_day <- format(Sys.Date(), "%d") + todays_year <- format(Sys.Date(), "%Y") + todays_date <- paste0("{", todays_month, " ", todays_day, ", ", todays_year, "}") + date_line <- gsub("\\{[^{}]*\\}", todays_date, date_line) + manual_tex[grep("date[{]", manual_tex)]<- date_line + writeLines(manual_tex, "SS330_User_Manual.tex") + shell: Rscript {0} + + - name: Commit date and version changes in SS330_User_Manual.tex + uses: EndBug/add-and-commit@v9 + with: + add: './docs/SS330_User_Manual.tex' + message: 'update version and date in manual' + +# HTML Portion + - name: Convert tex to html + run: pandoc SS330_User_Manual.tex -s -o SS330_User_Manual.html --toc --self-contained --mathjax --default-image-extension=png --number-sections --citeproc --variable linkcolor=#0033CC + # Note: for the following R code, may be a single command to deal with the double header issue before rendering. + - name: Edit html to improve formatting + run: | + html_txt <- readLines("SS330_User_Manual.html") + #read html snippits to add + html_snips <- readLines("html_usermanual_snippets.html") + # remove inline style + style_sec <- grep("style>", html_txt) + html_txt <- html_txt[-(style_sec[1]:style_sec[2])] + # add in the the navbar + navbar_snip <- grep("div", html_snips) + navbar_snip <- html_snips[navbar_snip[1]:navbar_snip[2]] + html_txt <- append(html_txt, navbar_snip, after = grep("_add:nnnCatalogLang(enUS)

", + "", html_txt, fixed = TRUE) + # add link to css + css_snip <- grep("", html_txt)) + # Add styling to tables add 1 because first col is on next row + first_lines <- grep("^", + "", + tmp_lines) + html_txt[first_lines] <- tmp_lines + # remove Typical Value double header + label <- grep(">Typical Value<", html_txt, fixed = TRUE) + diff_label <- diff(label) + to_rm <- which(diff_label <10) + # one to get rid of is test + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("Value<", html_txt, fixed = TRUE) + diff_label <- diff(label) + to_rm <- which(diff_label <10) + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("LO<", html_txt, fixed = TRUE) + diff_label <- diff(label) + to_rm <- which(diff_label < 20) + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("N Parameters<", html_txt, fixed = T) + diff_label <- diff(label) + to_rm <- which(diff_label == 5) + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("', + html_txt, fixed = TRUE) + html_txt <- append(html_txt, + "

Table of Contents

", + after = where_add[1]) + # Add title to references + where_add <- (grep("references csl-bib-body hanging-indent", + html_txt, fixed = TRUE) - 1) + html_txt <- append(html_txt, + '

17 References

', + after = where_add) + # Add references to table of contents + where_add <- grep("", html_txt, fixed = TRUE)-2 + html_txt <- append(html_txt, + '
  • 17 References
    • ', + after = where_add) + writeLines(html_txt, "SS330_User_Manual.html") + writeLines(html_txt, "docs/SS330_User_Manual_release.html") + shell: Rscript {0} + + - name: Commit html of manual to docs folder + uses: EndBug/add-and-commit@v9 + with: + add: './docs/SS330_User_Manual_release.html' + message: 'update manual html in docs' + +# PDF Portion + - name: remove rendered file, check that is gone. + run: | + rm -rf SS330_User_Manual.pdf + ls + # - name: add lua filter to the repository + # run: wget https://raw.githubusercontent.com/klpn/accpdf/master/common/tagged-filter.lua + + - name: Compile LaTeX document + uses: xu-cheng/latex-action@v2 + with: + root_file: SS330_User_Manual.tex + #args: --lua-filter=tagged-filter.lua + latexmk_use_lualatex: true + +# Update the version in index.md + - name: Update version in index.md + run: | + version <- readLines("version.txt", encoding = "UTF-8") + index <- readLines("docs/index.md", encoding = "UTF-8") + version <- gsub("v", "", version) + index[6] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, index[6]) + index[7] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, index[7]) + writeLines(index, "docs/index.md") + shell: Rscript {0} + +# Commit changes to the version in index.md to the repository + - name: Commit changes made to index.md + uses: EndBug/add-and-commit@v9 + with: + add: 'docs/index.md' + message: 'update index version' + + # Create Release + - name: Create Release + id: create_release + uses: actions/create-release@v1 + with: + tag_name: ${{ steps.version.outputs.version }} + release_name: ${{ steps.version.outputs.version }} Docs + draft: false + prerelease: false + + # Add html as artifact for release + # Could change link in index for html to asset location so don't need to add html to docs folder + - name: Upload release artifact - html manual + uses: actions/upload-release-asset@v1 + with: + upload_url: ${{ steps.create_release.outputs.upload_url }} + asset_path: ./SS330_User_Manual.html + asset_name: SS330_User_Manual.html + asset_content_type: application/html + + # Add pdf as artifact for release + - name: Upload release artifact 2 + uses: actions/upload-release-asset@v1 + with: + upload_url: ${{ steps.create_release.outputs.upload_url }} + asset_path: ./SS330_User_Manual.pdf + asset_name: SS330_User_Manual.pdf + asset_content_type: application/pdf + +# Render github pages + - name: render the rmd files + run: | + rmarkdown::render("User_Guides/ss_model_tips/ss_model_tips.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") + rmarkdown::render("User_Guides/getting_started/Getting_Started_SS.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") + shell: Rscript {0} + + - name: Deploy to GitHub pages + uses: JamesIves/github-pages-deploy-action@4.1.4 + with: + branch: gh-pages + folder: docs/ \ No newline at end of file From 50cebb57dcae58c59c6268e4531d1b5f839915e1 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Fri, 9 Jun 2023 10:53:59 -0400 Subject: [PATCH 02/13] add auto release yml (still needs updating) --- .github/workflows/release.yml | 258 ++++++++++++++++++++++++++++++++++ 1 file changed, 258 insertions(+) create mode 100644 .github/workflows/release.yml diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml new file mode 100644 index 00000000..19fc6d7f --- /dev/null +++ b/.github/workflows/release.yml @@ -0,0 +1,258 @@ +name: Release + +on: + workflow_dispatch: + +jobs: + + release: + runs-on: ubuntu-latest + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + R_REMOTES_NO_ERRORS_FROM_WARNINGS: true + RSPM: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" + + steps: + - name: Setup Git repository + uses: actions/checkout@v3 + fetch-depth: 0 + + - name: Update Ubuntu packages + run: sudo apt-get update + + - name: Setup R + uses: r-lib/actions/setup-r@v2 + with: + r-version: 'release' + + - name: Setup pandoc + uses: r-lib/actions/setup-pandoc@v2 + with: + pandoc-version: '2.14.0.3' + + - name: Install rmarkdown + run: install.packages("rmarkdown") + shell: Rscript {0} + +# Get previous version and then create the next version + - name: Application Version + id: version + uses: paulhatch/semantic-version@v5.0.2 + with: + tag_prefix: "v" + version_format: "v${major}.${minor}.${patch}" + +# Create version.txt to use when changing the version in the index.md + - name: Create version.txt + run: echo ${{ steps.version.outputs.version }} > version.txt + +# Update version and date in SS330_User_Manual.tex + - name: Update version and date in manual + run: | + version <- readLines("version.txt", encoding = "UTF-8") + version <- gsub("v", "", version) + manual_tex <- readLines("SS330_User_Manual.tex") + manual_tex[grep("Version", manual_tex)] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, manual_tex[grep("Version", manual_tex)]) + date_line <- manual_tex[grep("date[{]", manual_tex)] + todays_month <- format(Sys.Date(), "%B") + todays_day <- format(Sys.Date(), "%d") + todays_year <- format(Sys.Date(), "%Y") + todays_date <- paste0("{", todays_month, " ", todays_day, ", ", todays_year, "}") + date_line <- gsub("\\{[^{}]*\\}", todays_date, date_line) + manual_tex[grep("date[{]", manual_tex)]<- date_line + writeLines(manual_tex, "SS330_User_Manual.tex") + shell: Rscript {0} + + - name: Commit date and version changes in SS330_User_Manual.tex + uses: EndBug/add-and-commit@v9 + with: + add: './docs/SS330_User_Manual.tex' + message: 'update version and date in manual' + +# HTML Portion + - name: Convert tex to html + run: pandoc SS330_User_Manual.tex -s -o SS330_User_Manual.html --toc --self-contained --mathjax --default-image-extension=png --number-sections --citeproc --variable linkcolor=#0033CC + # Note: for the following R code, may be a single command to deal with the double header issue before rendering. + - name: Edit html to improve formatting + run: | + html_txt <- readLines("SS330_User_Manual.html") + #read html snippits to add + html_snips <- readLines("html_usermanual_snippets.html") + # remove inline style + style_sec <- grep("style>", html_txt) + html_txt <- html_txt[-(style_sec[1]:style_sec[2])] + # add in the the navbar + navbar_snip <- grep("div", html_snips) + navbar_snip <- html_snips[navbar_snip[1]:navbar_snip[2]] + html_txt <- append(html_txt, navbar_snip, after = grep("_add:nnnCatalogLang(enUS)

    ", + "", html_txt, fixed = TRUE) + # add link to css + css_snip <- grep("", html_txt)) + # Add styling to tables add 1 because first col is on next row + first_lines <- grep("^", + "", + tmp_lines) + html_txt[first_lines] <- tmp_lines + # remove Typical Value double header + label <- grep(">Typical Value<", html_txt, fixed = TRUE) + diff_label <- diff(label) + to_rm <- which(diff_label <10) + # one to get rid of is test + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("Value<", html_txt, fixed = TRUE) + diff_label <- diff(label) + to_rm <- which(diff_label <10) + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("LO<", html_txt, fixed = TRUE) + diff_label <- diff(label) + to_rm <- which(diff_label < 20) + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("N Parameters<", html_txt, fixed = T) + diff_label <- diff(label) + to_rm <- which(diff_label == 5) + to_rm_lines <- label[to_rm+1] + for (i in to_rm_lines) { + start <- grep("', + html_txt, fixed = TRUE) + html_txt <- append(html_txt, + "

    Table of Contents

    ", + after = where_add[1]) + # Add title to references + where_add <- (grep("references csl-bib-body hanging-indent", + html_txt, fixed = TRUE) - 1) + html_txt <- append(html_txt, + '

    17 References

    ', + after = where_add) + # Add references to table of contents + where_add <- grep("", html_txt, fixed = TRUE)-2 + html_txt <- append(html_txt, + '
  • 17 References
    • ', + after = where_add) + writeLines(html_txt, "SS330_User_Manual.html") + writeLines(html_txt, "docs/SS330_User_Manual_release.html") + shell: Rscript {0} + + - name: Commit html of manual to docs folder + uses: EndBug/add-and-commit@v9 + with: + add: './docs/SS330_User_Manual_release.html' + message: 'update manual html in docs' + +# PDF Portion + - name: remove rendered file, check that is gone. + run: | + rm -rf SS330_User_Manual.pdf + ls + # - name: add lua filter to the repository + # run: wget https://raw.githubusercontent.com/klpn/accpdf/master/common/tagged-filter.lua + + - name: Compile LaTeX document + uses: xu-cheng/latex-action@v2 + with: + root_file: SS330_User_Manual.tex + #args: --lua-filter=tagged-filter.lua + latexmk_use_lualatex: true + +# Update the version in index.md + - name: Update version in index.md + run: | + version <- readLines("version.txt", encoding = "UTF-8") + index <- readLines("docs/index.md", encoding = "UTF-8") + version <- gsub("v", "", version) + index[6] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, index[6]) + index[7] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, index[7]) + writeLines(index, "docs/index.md") + shell: Rscript {0} + +# Commit changes to the version in index.md to the repository + - name: Commit changes made to index.md + uses: EndBug/add-and-commit@v9 + with: + add: 'docs/index.md' + message: 'update index version' + + # Create Release + - name: Create Release + id: create_release + uses: actions/create-release@v1 + with: + tag_name: ${{ steps.version.outputs.version }} + release_name: ${{ steps.version.outputs.version }} Docs + draft: false + prerelease: false + + # Add html as artifact for release + # Could change link in index for html to asset location so don't need to add html to docs folder + - name: Upload release artifact - html manual + uses: actions/upload-release-asset@v1 + with: + upload_url: ${{ steps.create_release.outputs.upload_url }} + asset_path: ./SS330_User_Manual.html + asset_name: SS330_User_Manual.html + asset_content_type: application/html + + # Add pdf as artifact for release + - name: Upload release artifact 2 + uses: actions/upload-release-asset@v1 + with: + upload_url: ${{ steps.create_release.outputs.upload_url }} + asset_path: ./SS330_User_Manual.pdf + asset_name: SS330_User_Manual.pdf + asset_content_type: application/pdf + +# Render github pages + - name: render the rmd files + run: | + rmarkdown::render("User_Guides/ss_model_tips/ss_model_tips.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") + rmarkdown::render("User_Guides/getting_started/Getting_Started_SS.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") + shell: Rscript {0} + + - name: Deploy to GitHub pages + uses: JamesIves/github-pages-deploy-action@4.1.4 + with: + branch: gh-pages + folder: docs/ \ No newline at end of file From d3334722604691915ba16133fdd99d5dcc2df695 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Wed, 23 Aug 2023 12:05:43 -0400 Subject: [PATCH 03/13] fix with using just _release file --- .github/workflows/release.yml | 23 +++++++++++++++-------- 1 file changed, 15 insertions(+), 8 deletions(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 19fc6d7f..778a4cef 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -1,6 +1,8 @@ name: Release on: + # push: + # branches: [auto-release-workflows] workflow_dispatch: jobs: @@ -71,11 +73,11 @@ jobs: # HTML Portion - name: Convert tex to html - run: pandoc SS330_User_Manual.tex -s -o SS330_User_Manual.html --toc --self-contained --mathjax --default-image-extension=png --number-sections --citeproc --variable linkcolor=#0033CC + run: pandoc SS330_User_Manual.tex -s -o SS330_User_Manual_release.html --toc --self-contained --mathjax --default-image-extension=png --number-sections --citeproc --variable linkcolor=#0033CC # Note: for the following R code, may be a single command to deal with the double header issue before rendering. - name: Edit html to improve formatting run: | - html_txt <- readLines("SS330_User_Manual.html") + html_txt <- readLines("SS330_User_Manual_release.html") #read html snippits to add html_snips <- readLines("html_usermanual_snippets.html") # remove inline style @@ -172,7 +174,7 @@ jobs: html_txt <- append(html_txt, '
  • 17 References
    • ', after = where_add) - writeLines(html_txt, "SS330_User_Manual.html") + writeLines(html_txt, "SS330_User_Manual_release.html") writeLines(html_txt, "docs/SS330_User_Manual_release.html") shell: Rscript {0} @@ -197,6 +199,11 @@ jobs: #args: --lua-filter=tagged-filter.lua latexmk_use_lualatex: true +# Change name of pdf file to include "_release" + - name: Add _release to pdf file name + run: | + mv SS330_User_Manual.pdf SS330_User_Manual_release.pdf + # Update the version in index.md - name: Update version in index.md run: | @@ -231,17 +238,17 @@ jobs: uses: actions/upload-release-asset@v1 with: upload_url: ${{ steps.create_release.outputs.upload_url }} - asset_path: ./SS330_User_Manual.html - asset_name: SS330_User_Manual.html + asset_path: ./SS330_User_Manual_release.html + asset_name: SS330_User_Manual_release.html asset_content_type: application/html # Add pdf as artifact for release - - name: Upload release artifact 2 + - name: Upload release artifact - pdf manual uses: actions/upload-release-asset@v1 with: upload_url: ${{ steps.create_release.outputs.upload_url }} - asset_path: ./SS330_User_Manual.pdf - asset_name: SS330_User_Manual.pdf + asset_path: ./SS330_User_Manual_release.pdf + asset_name: SS330_User_Manual_release.pdf asset_content_type: application/pdf # Render github pages From 9c93ca1fe21a68df95ba01fecbbe6e247386add6 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Mon, 16 Oct 2023 11:58:59 -0400 Subject: [PATCH 04/13] update ss to ss3 --- .github/workflows/release.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 778a4cef..c0477a09 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -254,8 +254,8 @@ jobs: # Render github pages - name: render the rmd files run: | - rmarkdown::render("User_Guides/ss_model_tips/ss_model_tips.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") - rmarkdown::render("User_Guides/getting_started/Getting_Started_SS.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") + rmarkdown::render("User_Guides/ss3_model_tips/ss3_model_tips.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") + rmarkdown::render("User_Guides/getting_started/Getting_Started_SS3.Rmd", output_format = c("html_document", "pdf_document"), output_dir = "docs") shell: Rscript {0} - name: Deploy to GitHub pages From 8f0d4613a013db873f464ee5061b2e9df042b3f7 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Mon, 16 Oct 2023 12:00:07 -0400 Subject: [PATCH 05/13] remove fetch-depth --- .github/workflows/release.yml | 1 - 1 file changed, 1 deletion(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index c0477a09..bf43da95 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -17,7 +17,6 @@ jobs: steps: - name: Setup Git repository uses: actions/checkout@v3 - fetch-depth: 0 - name: Update Ubuntu packages run: sudo apt-get update From e5de798a383150c589d45c1d93140be07484aa97 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Wed, 18 Oct 2023 15:19:53 -0400 Subject: [PATCH 06/13] checkoutv4; gsub changes --- .github/workflows/build-ss3-manual-html.yml | 2 +- .github/workflows/build-ss3-manual-pdf.yml | 2 +- .github/workflows/deploy-ss3-docs.yml | 2 +- .github/workflows/release.yml | 9 ++++----- 4 files changed, 7 insertions(+), 8 deletions(-) diff --git a/.github/workflows/build-ss3-manual-html.yml b/.github/workflows/build-ss3-manual-html.yml index c0611833..12a9abba 100644 --- a/.github/workflows/build-ss3-manual-html.yml +++ b/.github/workflows/build-ss3-manual-html.yml @@ -26,7 +26,7 @@ jobs: RSPM: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" steps: - name: Set up Git repository - uses: actions/checkout@v3 + uses: actions/checkout@v4 with: ref: ${{ inputs.ref }} diff --git a/.github/workflows/build-ss3-manual-pdf.yml b/.github/workflows/build-ss3-manual-pdf.yml index 41552585..094f2de9 100644 --- a/.github/workflows/build-ss3-manual-pdf.yml +++ b/.github/workflows/build-ss3-manual-pdf.yml @@ -23,7 +23,7 @@ jobs: steps: - name: Set up Git repository - uses: actions/checkout@v3 + uses: actions/checkout@v4 with: ref: ${{ inputs.ref }} diff --git a/.github/workflows/deploy-ss3-docs.yml b/.github/workflows/deploy-ss3-docs.yml index 50bf5111..91375e90 100644 --- a/.github/workflows/deploy-ss3-docs.yml +++ b/.github/workflows/deploy-ss3-docs.yml @@ -18,7 +18,7 @@ jobs: RSPM: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" steps: - name: Set up Git repository - uses: actions/checkout@v3 + uses: actions/checkout@v4 - name: Set up R uses: r-lib/actions/setup-r@v2 diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index bf43da95..18688f71 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -16,7 +16,7 @@ jobs: steps: - name: Setup Git repository - uses: actions/checkout@v3 + uses: actions/checkout@v4 - name: Update Ubuntu packages run: sudo apt-get update @@ -203,14 +203,13 @@ jobs: run: | mv SS330_User_Manual.pdf SS330_User_Manual_release.pdf -# Update the version in index.md +# Update the version in index.md [this will need to change when website is updated] - name: Update version in index.md run: | version <- readLines("version.txt", encoding = "UTF-8") - index <- readLines("docs/index.md", encoding = "UTF-8") + index <- readLines("docs/index.md", encoding = "UTF-8") version <- gsub("v", "", version) - index[6] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, index[6]) - index[7] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, index[7]) + index <- gsub("v[0-9]\\.[0-9]{2}\\.[0-9]{2}", version, index) writeLines(index, "docs/index.md") shell: Rscript {0} From 442e0919b5511ceb3a39320a9d1d73ec62dcc757 Mon Sep 17 00:00:00 2001 From: Elizabeth Gugliotti Date: Thu, 26 Oct 2023 11:50:42 -0400 Subject: [PATCH 07/13] Update release.yml remove "v" from version format; remove gsub() that remove the "v" from the version remove latex version update semantic version to 5.3.0 --- .github/workflows/release.yml | 10 +++------- 1 file changed, 3 insertions(+), 7 deletions(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 18688f71..b2485d53 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -28,8 +28,6 @@ jobs: - name: Setup pandoc uses: r-lib/actions/setup-pandoc@v2 - with: - pandoc-version: '2.14.0.3' - name: Install rmarkdown run: install.packages("rmarkdown") @@ -38,10 +36,10 @@ jobs: # Get previous version and then create the next version - name: Application Version id: version - uses: paulhatch/semantic-version@v5.0.2 + uses: paulhatch/semantic-version@v5.3.0 with: tag_prefix: "v" - version_format: "v${major}.${minor}.${patch}" + version_format: "${major}.${minor}.${patch}" # Create version.txt to use when changing the version in the index.md - name: Create version.txt @@ -51,7 +49,6 @@ jobs: - name: Update version and date in manual run: | version <- readLines("version.txt", encoding = "UTF-8") - version <- gsub("v", "", version) manual_tex <- readLines("SS330_User_Manual.tex") manual_tex[grep("Version", manual_tex)] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, manual_tex[grep("Version", manual_tex)]) date_line <- manual_tex[grep("date[{]", manual_tex)] @@ -208,7 +205,6 @@ jobs: run: | version <- readLines("version.txt", encoding = "UTF-8") index <- readLines("docs/index.md", encoding = "UTF-8") - version <- gsub("v", "", version) index <- gsub("v[0-9]\\.[0-9]{2}\\.[0-9]{2}", version, index) writeLines(index, "docs/index.md") shell: Rscript {0} @@ -260,4 +256,4 @@ jobs: uses: JamesIves/github-pages-deploy-action@4.1.4 with: branch: gh-pages - folder: docs/ \ No newline at end of file + folder: docs/ From 19cce8b581950eba2d7ff37001ec2bd69ab4d08f Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Thu, 26 Oct 2023 12:05:36 -0400 Subject: [PATCH 08/13] update gsub commands for updating version and date --- .github/workflows/release.yml | 32 ++++++++++++++++++++++---------- 1 file changed, 22 insertions(+), 10 deletions(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index b2485d53..66e1ebee 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -50,22 +50,34 @@ jobs: run: | version <- readLines("version.txt", encoding = "UTF-8") manual_tex <- readLines("SS330_User_Manual.tex") - manual_tex[grep("Version", manual_tex)] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, manual_tex[grep("Version", manual_tex)]) - date_line <- manual_tex[grep("date[{]", manual_tex)] - todays_month <- format(Sys.Date(), "%B") - todays_day <- format(Sys.Date(), "%d") - todays_year <- format(Sys.Date(), "%Y") - todays_date <- paste0("{", todays_month, " ", todays_day, ", ", todays_year, "}") - date_line <- gsub("\\{[^{}]*\\}", todays_date, date_line) - manual_tex[grep("date[{]", manual_tex)]<- date_line - writeLines(manual_tex, "SS330_User_Manual.tex") + manual_tex[grep("Version", manual_tex)] <- gsub( + pattern = "[0-9].[0-9][0-9].[0-9][0-9]", + replacement = version, + x = manual_tex[grep(pattern = "Version", x = manual_tex)] + ) + date_line <- grep(pattern = "date\\{", x = manual_tex) + todays_date <- format(x = Sys.Date(), "%B %d, %Y") + manual_tex[date_line] <- gsub( + pattern = "\\{[A-Za-z0-9, ]+", + replacement = paste0("{", todays_date), + x = manual_tex[date_line] + + # manual_tex[grep("Version", manual_tex)] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, manual_tex[grep("Version", manual_tex)]) + # date_line <- manual_tex[grep("date[{]", manual_tex)] + # todays_month <- format(Sys.Date(), "%B") + # todays_day <- format(Sys.Date(), "%d") + # todays_year <- format(Sys.Date(), "%Y") + # todays_date <- paste0("{", todays_month, " ", todays_day, ", ", todays_year, "}") + # date_line <- gsub("\\{[^{}]*\\}", todays_date, date_line) + # manual_tex[grep("date[{]", manual_tex)]<- date_line + # writeLines(manual_tex, "SS330_User_Manual.tex") shell: Rscript {0} - name: Commit date and version changes in SS330_User_Manual.tex uses: EndBug/add-and-commit@v9 with: add: './docs/SS330_User_Manual.tex' - message: 'update version and date in manual' + message: 'release: update version and date in manual' # HTML Portion - name: Convert tex to html From 5f92a37ea576ddb450b894c8ab392c09e473739b Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Thu, 26 Oct 2023 12:06:02 -0400 Subject: [PATCH 09/13] remove previous version --- .github/workflows/release.yml | 10 ---------- 1 file changed, 10 deletions(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 66e1ebee..6cd60c50 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -61,16 +61,6 @@ jobs: pattern = "\\{[A-Za-z0-9, ]+", replacement = paste0("{", todays_date), x = manual_tex[date_line] - - # manual_tex[grep("Version", manual_tex)] <- gsub("[0-9].[0-9][0-9].[0-9][0-9]", version, manual_tex[grep("Version", manual_tex)]) - # date_line <- manual_tex[grep("date[{]", manual_tex)] - # todays_month <- format(Sys.Date(), "%B") - # todays_day <- format(Sys.Date(), "%d") - # todays_year <- format(Sys.Date(), "%Y") - # todays_date <- paste0("{", todays_month, " ", todays_day, ", ", todays_year, "}") - # date_line <- gsub("\\{[^{}]*\\}", todays_date, date_line) - # manual_tex[grep("date[{]", manual_tex)]<- date_line - # writeLines(manual_tex, "SS330_User_Manual.tex") shell: Rscript {0} - name: Commit date and version changes in SS330_User_Manual.tex From 5f0bb122b432ed301f6d2697335d41564a2f0218 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Thu, 26 Oct 2023 12:07:03 -0400 Subject: [PATCH 10/13] write lines command got deleted, add back in --- .github/workflows/release.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 6cd60c50..b16a602e 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -61,6 +61,7 @@ jobs: pattern = "\\{[A-Za-z0-9, ]+", replacement = paste0("{", todays_date), x = manual_tex[date_line] + writeLines(text = manual_tex, con = "SS330_User_Manual.tex") shell: Rscript {0} - name: Commit date and version changes in SS330_User_Manual.tex From f1b166fcee3bb9617df3f9590b2fd08aa90143d1 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Fri, 27 Oct 2023 09:50:54 -0400 Subject: [PATCH 11/13] use R code for release & html rather than in yml --- .github/workflows/build-ss3-manual-html.yml | 213 +++++++++++--------- .github/workflows/release.yml | 116 ++--------- Rcode/edit_html_improve_formatting.R | 110 ++++++++++ 3 files changed, 238 insertions(+), 201 deletions(-) create mode 100644 Rcode/edit_html_improve_formatting.R diff --git a/.github/workflows/build-ss3-manual-html.yml b/.github/workflows/build-ss3-manual-html.yml index 12a9abba..6be6e2cc 100644 --- a/.github/workflows/build-ss3-manual-html.yml +++ b/.github/workflows/build-ss3-manual-html.yml @@ -46,108 +46,123 @@ jobs: - name: Convert tex to html run: pandoc SS330_User_Manual.tex -s -o SS330_User_Manual.html --toc --self-contained --mathjax --default-image-extension=png --number-sections --citeproc --variable linkcolor=#0033CC # Note: for the following R code, may be a single command to deal with the double header issue before rendering. - - name: Edit html to improve formatting + + # Create user_manual_name.txt to user for the name of the html file + # (will not have release here but will for the release.yml) + - name: Create user_manual_name.txt run: | - html_txt <- readLines("SS330_User_Manual.html") - #read html snippits to add - html_snips <- readLines("html_usermanual_snippets.html") - # remove inline style - style_sec <- grep("style>", html_txt) - html_txt <- html_txt[-(style_sec[1]:style_sec[2])] - # add in the the navbar - navbar_snip <- grep("div", html_snips) - navbar_snip <- html_snips[navbar_snip[1]:navbar_snip[2]] - html_txt <- append(html_txt, navbar_snip, after = grep("_add:nnnCatalogLang(enUS)

    ", - "", html_txt, fixed = TRUE) - # add link to css - css_snip <- grep("", html_txt)) - # Add styling to tables add 1 because first col is on next row - first_lines <- grep("^", - "", - tmp_lines) - html_txt[first_lines] <- tmp_lines - # remove Typical Value double header - label <- grep(">Typical Value<", html_txt, fixed = TRUE) - diff_label <- diff(label) - to_rm <- which(diff_label <10) - # one to get rid of is test - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("Value<", html_txt, fixed = TRUE) - diff_label <- diff(label) - to_rm <- which(diff_label <10) - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("LO<", html_txt, fixed = TRUE) - diff_label <- diff(label) - to_rm <- which(diff_label < 20) - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("N Parameters<", html_txt, fixed = T) - diff_label <- diff(label) - to_rm <- which(diff_label == 5) - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("', - html_txt, fixed = TRUE) - html_txt <- append(html_txt, - "

    Table of Contents

    ", - after = where_add[1]) - # Add title to references - where_add <- (grep("references csl-bib-body hanging-indent", - html_txt, fixed = TRUE) - 1) - html_txt <- append(html_txt, - '

    17 References

    ', - after = where_add) - # Add references to table of contents - where_add <- grep("", html_txt, fixed = TRUE)-2 - html_txt <- append(html_txt, - '
  • 17 References
    • ', - after = where_add) - writeLines(html_txt, "SS330_User_Manual.html") + name_txt <- file("user_manual_name.txt") + writeLines("SS330_User_Manual.html", name_txt) + close(name_txt) shell: Rscript {0} + - name: Run R script to create html + run: | + source("Rcode/edit_html_improve_formatting.R") + shell: Rscript {0} + + # - name: Edit html to improve formatting + # run: | + # html_txt <- readLines("SS330_User_Manual.html") + # #read html snippits to add + # html_snips <- readLines("html_usermanual_snippets.html") + # # remove inline style + # style_sec <- grep("style>", html_txt) + # html_txt <- html_txt[-(style_sec[1]:style_sec[2])] + # # add in the the navbar + # navbar_snip <- grep("div", html_snips) + # navbar_snip <- html_snips[navbar_snip[1]:navbar_snip[2]] + # html_txt <- append(html_txt, navbar_snip, after = grep("_add:nnnCatalogLang(enUS)

    ", + # "", html_txt, fixed = TRUE) + # # add link to css + # css_snip <- grep("", html_txt)) + # # Add styling to tables add 1 because first col is on next row + # first_lines <- grep("^", + # "", + # tmp_lines) + # html_txt[first_lines] <- tmp_lines + # # remove Typical Value double header + # label <- grep(">Typical Value<", html_txt, fixed = TRUE) + # diff_label <- diff(label) + # to_rm <- which(diff_label <10) + # # one to get rid of is test + # to_rm_lines <- label[to_rm+1] + # for (i in to_rm_lines) { + # start <- grep("Value<", html_txt, fixed = TRUE) + # diff_label <- diff(label) + # to_rm <- which(diff_label <10) + # to_rm_lines <- label[to_rm+1] + # for (i in to_rm_lines) { + # start <- grep("LO<", html_txt, fixed = TRUE) + # diff_label <- diff(label) + # to_rm <- which(diff_label < 20) + # to_rm_lines <- label[to_rm+1] + # for (i in to_rm_lines) { + # start <- grep("N Parameters<", html_txt, fixed = T) + # diff_label <- diff(label) + # to_rm <- which(diff_label == 5) + # to_rm_lines <- label[to_rm+1] + # for (i in to_rm_lines) { + # start <- grep("', + # html_txt, fixed = TRUE) + # html_txt <- append(html_txt, + # "

    Table of Contents

    ", + # after = where_add[1]) + # # Add title to references + # where_add <- (grep("references csl-bib-body hanging-indent", + # html_txt, fixed = TRUE) - 1) + # html_txt <- append(html_txt, + # '

    17 References

    ', + # after = where_add) + # # Add references to table of contents + # where_add <- grep("", html_txt, fixed = TRUE)-2 + # html_txt <- append(html_txt, + # '
  • 17 References
    • ', + # after = where_add) + # writeLines(html_txt, "SS330_User_Manual.html") + # shell: Rscript {0} + - name: upload html file as artifact uses: actions/upload-artifact@v3 with: diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index b16a602e..95dd5508 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -68,114 +68,26 @@ jobs: uses: EndBug/add-and-commit@v9 with: add: './docs/SS330_User_Manual.tex' - message: 'release: update version and date in manual' + message: 'release: update version and date in manual' + # HTML Portion - name: Convert tex to html run: pandoc SS330_User_Manual.tex -s -o SS330_User_Manual_release.html --toc --self-contained --mathjax --default-image-extension=png --number-sections --citeproc --variable linkcolor=#0033CC # Note: for the following R code, may be a single command to deal with the double header issue before rendering. - - name: Edit html to improve formatting +# Create user_manual_name.txt to user for the name of the html file +# (will be release here but will not have release for the build-ss3-manual.yml) + - name: Create user_manual_name.txt + run: | + name_txt <- file("user_manual_name.txt") + writeLines("SS330_User_Manual_release.html", name_txt) + close(name_txt) + shell: Rscript {0} + + - name: Run R script to create html run: | - html_txt <- readLines("SS330_User_Manual_release.html") - #read html snippits to add - html_snips <- readLines("html_usermanual_snippets.html") - # remove inline style - style_sec <- grep("style>", html_txt) - html_txt <- html_txt[-(style_sec[1]:style_sec[2])] - # add in the the navbar - navbar_snip <- grep("div", html_snips) - navbar_snip <- html_snips[navbar_snip[1]:navbar_snip[2]] - html_txt <- append(html_txt, navbar_snip, after = grep("_add:nnnCatalogLang(enUS)

    ", - "", html_txt, fixed = TRUE) - # add link to css - css_snip <- grep("", html_txt)) - # Add styling to tables add 1 because first col is on next row - first_lines <- grep("^", - "", - tmp_lines) - html_txt[first_lines] <- tmp_lines - # remove Typical Value double header - label <- grep(">Typical Value<", html_txt, fixed = TRUE) - diff_label <- diff(label) - to_rm <- which(diff_label <10) - # one to get rid of is test - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("Value<", html_txt, fixed = TRUE) - diff_label <- diff(label) - to_rm <- which(diff_label <10) - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("LO<", html_txt, fixed = TRUE) - diff_label <- diff(label) - to_rm <- which(diff_label < 20) - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("N Parameters<", html_txt, fixed = T) - diff_label <- diff(label) - to_rm <- which(diff_label == 5) - to_rm_lines <- label[to_rm+1] - for (i in to_rm_lines) { - start <- grep("', - html_txt, fixed = TRUE) - html_txt <- append(html_txt, - "

    Table of Contents

    ", - after = where_add[1]) - # Add title to references - where_add <- (grep("references csl-bib-body hanging-indent", - html_txt, fixed = TRUE) - 1) - html_txt <- append(html_txt, - '

    17 References

    ', - after = where_add) - # Add references to table of contents - where_add <- grep("", html_txt, fixed = TRUE)-2 - html_txt <- append(html_txt, - '
  • 17 References
    • ', - after = where_add) - writeLines(html_txt, "SS330_User_Manual_release.html") - writeLines(html_txt, "docs/SS330_User_Manual_release.html") - shell: Rscript {0} + source("Rcode/edit_html_improve_formatting.R") + shell: Rscript {0} - name: Commit html of manual to docs folder uses: EndBug/add-and-commit@v9 diff --git a/Rcode/edit_html_improve_formatting.R b/Rcode/edit_html_improve_formatting.R new file mode 100644 index 00000000..53e98980 --- /dev/null +++ b/Rcode/edit_html_improve_formatting.R @@ -0,0 +1,110 @@ +# Edit html to improve formatting +# Used in the build-ss3-manual-html.yml workflow and the +# release.yml workflow + +user_manual_name <- readLines("user_manual_name.txt", warn = FALSE) + +html_txt <- readLines(user_manual_name) +# html_txt <- readLines("SS330_User_Manual_release.html") + +#read html snippits to add +html_snips <- readLines("html_usermanual_snippets.html") +# remove inline style +style_sec <- grep("style>", html_txt) +html_txt <- html_txt[-(style_sec[1]:style_sec[2])] +# add in the the navbar +navbar_snip <- grep("div", html_snips) +navbar_snip <- html_snips[navbar_snip[1]:navbar_snip[2]] +html_txt <- append(html_txt, navbar_snip, after = grep("_add:nnnCatalogLang(enUS)

    ", + "", html_txt, fixed = TRUE) +# add link to css +css_snip <- grep("", html_txt)) +# Add styling to tables add 1 because first col is on next row +first_lines <- grep("^", + "", + tmp_lines) +html_txt[first_lines] <- tmp_lines +# remove Typical Value double header +label <- grep(">Typical Value<", html_txt, fixed = TRUE) +diff_label <- diff(label) +to_rm <- which(diff_label <10) +# one to get rid of is test +to_rm_lines <- label[to_rm+1] +for (i in to_rm_lines) { + start <- grep("Value<", html_txt, fixed = TRUE) +diff_label <- diff(label) +to_rm <- which(diff_label <10) +to_rm_lines <- label[to_rm+1] +for (i in to_rm_lines) { + start <- grep("LO<", html_txt, fixed = TRUE) +diff_label <- diff(label) +to_rm <- which(diff_label < 20) +to_rm_lines <- label[to_rm+1] +for (i in to_rm_lines) { + start <- grep("N Parameters<", html_txt, fixed = T) +diff_label <- diff(label) +to_rm <- which(diff_label == 5) +to_rm_lines <- label[to_rm+1] +for (i in to_rm_lines) { + start <- grep("', + html_txt, fixed = TRUE) +html_txt <- append(html_txt, + "

    Table of Contents

    ", + after = where_add[1]) +# Add title to references +where_add <- (grep("references csl-bib-body hanging-indent", + html_txt, fixed = TRUE) - 1) +html_txt <- append(html_txt, + '

    17 References

    ', + after = where_add) +# Add references to table of contents +where_add <- grep("", html_txt, fixed = TRUE)-2 +html_txt <- append(html_txt, + '
  • 17 References
    • ', + after = where_add) + +writeLines(html_txt, user_manual_name) +writeLines(html_txt, user_manual_name) +# writeLines(html_txt, "SS330_User_Manual_release.html") +# writeLines(html_txt, "docs/SS330_User_Manual_release.html") \ No newline at end of file From 8467e195da2206978ef4332706990dd333c89654 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Fri, 27 Oct 2023 09:52:02 -0400 Subject: [PATCH 12/13] remove R code from html yml --- .github/workflows/build-ss3-manual-html.yml | 102 -------------------- 1 file changed, 102 deletions(-) diff --git a/.github/workflows/build-ss3-manual-html.yml b/.github/workflows/build-ss3-manual-html.yml index 6be6e2cc..2e9fa1d7 100644 --- a/.github/workflows/build-ss3-manual-html.yml +++ b/.github/workflows/build-ss3-manual-html.yml @@ -61,108 +61,6 @@ jobs: source("Rcode/edit_html_improve_formatting.R") shell: Rscript {0} - # - name: Edit html to improve formatting - # run: | - # html_txt <- readLines("SS330_User_Manual.html") - # #read html snippits to add - # html_snips <- readLines("html_usermanual_snippets.html") - # # remove inline style - # style_sec <- grep("style>", html_txt) - # html_txt <- html_txt[-(style_sec[1]:style_sec[2])] - # # add in the the navbar - # navbar_snip <- grep("div", html_snips) - # navbar_snip <- html_snips[navbar_snip[1]:navbar_snip[2]] - # html_txt <- append(html_txt, navbar_snip, after = grep("_add:nnnCatalogLang(enUS)

    ", - # "", html_txt, fixed = TRUE) - # # add link to css - # css_snip <- grep("", html_txt)) - # # Add styling to tables add 1 because first col is on next row - # first_lines <- grep("^", - # "", - # tmp_lines) - # html_txt[first_lines] <- tmp_lines - # # remove Typical Value double header - # label <- grep(">Typical Value<", html_txt, fixed = TRUE) - # diff_label <- diff(label) - # to_rm <- which(diff_label <10) - # # one to get rid of is test - # to_rm_lines <- label[to_rm+1] - # for (i in to_rm_lines) { - # start <- grep("Value<", html_txt, fixed = TRUE) - # diff_label <- diff(label) - # to_rm <- which(diff_label <10) - # to_rm_lines <- label[to_rm+1] - # for (i in to_rm_lines) { - # start <- grep("LO<", html_txt, fixed = TRUE) - # diff_label <- diff(label) - # to_rm <- which(diff_label < 20) - # to_rm_lines <- label[to_rm+1] - # for (i in to_rm_lines) { - # start <- grep("N Parameters<", html_txt, fixed = T) - # diff_label <- diff(label) - # to_rm <- which(diff_label == 5) - # to_rm_lines <- label[to_rm+1] - # for (i in to_rm_lines) { - # start <- grep("', - # html_txt, fixed = TRUE) - # html_txt <- append(html_txt, - # "

    Table of Contents

    ", - # after = where_add[1]) - # # Add title to references - # where_add <- (grep("references csl-bib-body hanging-indent", - # html_txt, fixed = TRUE) - 1) - # html_txt <- append(html_txt, - # '

    17 References

    ', - # after = where_add) - # # Add references to table of contents - # where_add <- grep("", html_txt, fixed = TRUE)-2 - # html_txt <- append(html_txt, - # '
  • 17 References
    • ', - # after = where_add) - # writeLines(html_txt, "SS330_User_Manual.html") - # shell: Rscript {0} - - name: upload html file as artifact uses: actions/upload-artifact@v3 with: From f314a82137d9d4bb9e07860b7fa7816f313adf04 Mon Sep 17 00:00:00 2001 From: e-gugliotti-NOAA Date: Fri, 27 Oct 2023 09:58:29 -0400 Subject: [PATCH 13/13] use ubuntu-latest --- .github/workflows/build-ss3-manual-html.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/build-ss3-manual-html.yml b/.github/workflows/build-ss3-manual-html.yml index 2e9fa1d7..e860a120 100644 --- a/.github/workflows/build-ss3-manual-html.yml +++ b/.github/workflows/build-ss3-manual-html.yml @@ -20,7 +20,7 @@ on: jobs: build-html: - runs-on: ubuntu-20.04 + runs-on: ubuntu-latest env: R_REMOTES_NO_ERRORS_FROM_WARNINGS: true RSPM: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"