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topics.html
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<!DOCTYPE html>
<html>
<head>
<title>topics</title>
<link rel="stylesheet" type="text/css" href="stylesheets/main.css">
<link rel="stylesheet" type="text/css" href="stylesheets/footer.css">
<link rel="shortcut icon" type="image/x-icon" href="favicon.ico">
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/4.7.0/css/font-awesome.min.css">
</head>
<body>
<nav class="navigation">
<ul>
<li><a href="index.html">home</a></li>
<li><a href="topics.html">topics</a></li>
<li><a href="resources.html">resources</a></li>
</ul>
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<div id="banner">
<div class="content">
<h1>topics</h1>
</div>
</div>
<div id="main" class="content">
<h3>topics</h3>
<ul>
<li>defining precisely what we mean by normalization</li>
<li>defining success: how do we know when our data are normalized appropriately?
<li>what are good biological, internal, external, or negative controls?</li>
<li>what is the appropriate statistical distribution of the data?</li>
<li>what is the appropriate variance stabilization transform to apply to the data?</li>
<li>what is more appropriate - a modular versus monolithic (joint) approach to normalization — is one more appropriate?</li>
<li>how should we handle zeros/missing-values in the data?</li>
<li>how can we effectively benchmark our methods? what data/simulations? what metrics?</li>
<li>how can we best communicate the findings of these meetings?</li>
<li>what should we do next?</li>
</ul>
<h3>agenda</h3>
<p>Coming soon! normjam will be an unconventional meeting—it will neither be just talks, nor will it be a full hackathon. It will be a mix, with careful thought put into the agenda beforehand. We anticipate much participation from attendees to make this a success!</p>
</div>
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