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Neonatal #7

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merged 62 commits into from
May 19, 2024
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d45a000
rm old camkii sys
sosiristseng Apr 28, 2024
a76b6cc
pkg
sosiristseng Apr 29, 2024
23339da
wip
sosiristseng Apr 29, 2024
4756996
Beta adrenergic system
sosiristseng Apr 29, 2024
a9ec9cb
pkg upd
sosiristseng Apr 29, 2024
b1e4be1
iso
sosiristseng Apr 29, 2024
82dc3b1
upd
sosiristseng Apr 30, 2024
0c32883
simplify pkg
sosiristseng Apr 30, 2024
5e56090
istim
sosiristseng Apr 30, 2024
018218c
rm data
sosiristseng Apr 30, 2024
3af7f61
ICs for BAR
sosiristseng Apr 30, 2024
95b31c4
pkg
sosiristseng May 1, 2024
c8be379
pkg
sosiristseng May 1, 2024
2426b3f
oxidized complex can release CaM now
sosiristseng May 1, 2024
ba87c88
pkg
sosiristseng May 1, 2024
68da748
ROS 0 1 2
sosiristseng May 1, 2024
583514f
camkii
sosiristseng May 2, 2024
0747de0
pkg
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05d163e
pkg
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32feaa7
pkg
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fb03337
pkg
sosiristseng May 8, 2024
2ae9239
pkg
sosiristseng May 8, 2024
71d96a8
figure fitting
sosiristseng May 8, 2024
d74f782
units
sosiristseng May 8, 2024
e93cdd4
units
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0a643c1
units
sosiristseng May 8, 2024
795d201
pkg
sosiristseng May 9, 2024
192ca4a
wip
sosiristseng May 9, 2024
6235c62
use floor
sosiristseng May 9, 2024
b707047
merge pde
sosiristseng May 9, 2024
c220764
wip
sosiristseng May 9, 2024
30e4d9f
pkg
sosiristseng May 10, 2024
1fb5233
pkg
sosiristseng May 12, 2024
41d9b0c
pkg
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b06ce9d
pkg
sosiristseng May 14, 2024
f69cc24
move
sosiristseng May 14, 2024
c4878c1
wip
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db1b802
wip
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c403ac7
pkg
sosiristseng May 14, 2024
9b513c4
pkg upd
sosiristseng May 15, 2024
96197b5
wip
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1a3f304
pkg
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ca6bb51
pkg
sosiristseng May 16, 2024
d0257e0
pkg
sosiristseng May 16, 2024
740caf3
add DifferentialEquations
sosiristseng May 16, 2024
0dfa8b9
wip
sosiristseng May 16, 2024
3f02155
pkg
sosiristseng May 16, 2024
ca829e5
WIP
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6f8c6e6
pkg
sosiristseng May 17, 2024
45b204b
WIP
sosiristseng May 17, 2024
1069a86
pkg
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8d596c7
pkg
sosiristseng May 17, 2024
5767b7d
pkg
sosiristseng May 17, 2024
bc688c3
wip
sosiristseng May 17, 2024
f468ad6
merge
sosiristseng May 18, 2024
2fbe708
mv add rates to utils
sosiristseng May 18, 2024
c2a4aa4
no catalyst wip
sosiristseng May 18, 2024
a5218a1
pkg
sosiristseng May 19, 2024
dee4ef7
pkg
sosiristseng May 19, 2024
09db7a8
make example work
sosiristseng May 19, 2024
e14f061
bar sys in MTK
sosiristseng May 19, 2024
936e158
Merge branch 'main' into neonatal
sosiristseng May 19, 2024
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323 changes: 175 additions & 148 deletions Manifest.toml

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4 changes: 0 additions & 4 deletions Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -4,11 +4,7 @@ authors = ["Wen-Wei Tseng <[email protected]>"]
version = "0.1.0"

[deps]
Catalyst = "479239e8-5488-4da2-87a7-35f2df7eef83"
DelimitedFiles = "8bb1440f-4735-579b-a4ab-409b98df4dab"
DiffEqCallbacks = "459566f4-90b8-5000-8ac3-15dfb0a30def"
DifferentialEquations = "0c46a032-eb83-5123-abaf-570d42b7fbaa"
ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78"
NaNMath = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
174 changes: 0 additions & 174 deletions data/yfin_OE_1Hz.tsv

This file was deleted.

174 changes: 0 additions & 174 deletions data/yfin_OE_NoNaGain_1Hz.tsv

This file was deleted.

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