diff --git a/Manifest.toml b/Manifest.toml index ec4b6315..b1656f59 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -77,9 +77,9 @@ version = "1.1.0" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "3ac52471386dfcc0f6a3c8aeb37ed37c37701128" +git-tree-sha1 = "931f3f49902e9b6b527fd7cd02d1cd7b4a84264c" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.4.1" +version = "1.5.0" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -179,9 +179,9 @@ version = "13.5.1" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "1287e3872d646eed95198457873249bd9f0caed2" +git-tree-sha1 = "ad25e7d21ce10e01de973cdc68ad0f850a953c52" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.20.1" +version = "1.21.1" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -282,9 +282,9 @@ version = "0.2.3" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] -git-tree-sha1 = "8cfa272e8bdedfa88b6aefbbca7c19f1befac519" +git-tree-sha1 = "9c4708e3ed2b799e6124b5673a712dda0b596a9b" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" -version = "2.3.0" +version = "2.3.1" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] @@ -353,9 +353,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "6af33c2eb7478db06bcf5c810e6f3dda53aac2ac" +git-tree-sha1 = "fefc2eeabecb745f1b1e1f91634381f7c81bd75d" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.146.0" +version = "6.146.1" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -390,9 +390,9 @@ weakdeps = ["OrdinaryDiffEq", "Sundials"] [[deps.DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "319377c927a4aa1f491228b2ac23f3554a3497c6" +git-tree-sha1 = "3d440ee25f48e5c7b08af71f2997daca45bf6856" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.20.0" +version = "5.20.1" [deps.DiffEqNoiseProcess.extensions] DiffEqNoiseProcessReverseDiffExt = "ReverseDiff" @@ -512,9 +512,9 @@ version = "2.5.0+0" [[deps.ExponentialUtilities]] deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "PrecompileTools", "Printf", "SparseArrays", "libblastrampoline_jll"] -git-tree-sha1 = "602e4585bcbd5a25bc06f514724593d13ff9e862" +git-tree-sha1 = "fd97b2f33cb0f1c8e3e0e96ac6825e62b4b5ab44" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.25.0" +version = "1.26.0" [[deps.ExprTools]] git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" @@ -646,9 +646,9 @@ version = "0.1.3" [[deps.Functors]] deps = ["LinearAlgebra"] -git-tree-sha1 = "9a68d75d466ccc1218d0552a8e1631151c569545" +git-tree-sha1 = "166c544477f97bbadc7179ede1c1868e0e9b426b" uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196" -version = "0.4.5" +version = "0.4.7" [[deps.Future]] deps = ["Random"] @@ -779,13 +779,13 @@ weakdeps = ["Unitful"] InterpolationsUnitfulExt = "Unitful" [[deps.IntervalSets]] -deps = ["Dates", "Random"] -git-tree-sha1 = "3d8866c029dd6b16e69e0d4a939c4dfcb98fac47" +git-tree-sha1 = "581191b15bcb56a2aa257e9c160085d0f128a380" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.7.8" -weakdeps = ["Statistics"] +version = "0.7.9" +weakdeps = ["Random", "Statistics"] [deps.IntervalSets.extensions] + IntervalSetsRandomExt = "Random" IntervalSetsStatisticsExt = "Statistics" [[deps.InvertedIndices]] @@ -828,10 +828,10 @@ uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "3.0.1+0" [[deps.JuliaFormatter]] -deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"] -git-tree-sha1 = "8f5295e46f594ad2d8652f1098488a77460080cd" +deps = ["CSTParser", "Combinatorics", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"] +git-tree-sha1 = "bf3bdb6d310b8106fa13f69eb9cd9c6a53b82b5b" uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899" -version = "1.0.45" +version = "1.0.47" [[deps.JumpProcesses]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "UnPack"] @@ -1225,9 +1225,9 @@ version = "1.2.0" [[deps.NonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Preferences", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "TimerOutputs"] -git-tree-sha1 = "323d2a61f4adc4dfe404bf332b59690253b4f4f2" +git-tree-sha1 = "2d0fff5b88cb528c7c908eb2421f77658fc70344" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "3.5.3" +version = "3.5.4" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" @@ -1298,9 +1298,9 @@ version = "0.5.5+0" [[deps.Optim]] deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "47fea72de134f75b105a5d4a1abe5c6aec89d390" +git-tree-sha1 = "d024bfb56144d947d4fafcd9cb5cafbe3410b133" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.9.1" +version = "1.9.2" [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1378,9 +1378,9 @@ version = "1.4.0" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "38a748946dca52a622e79eea6ed35c6737499109" +git-tree-sha1 = "c4fa93d7d66acad8f6f4ff439576da9d2e890ee0" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.40.0" +version = "1.40.1" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -1428,9 +1428,9 @@ version = "0.2.4" [[deps.PreallocationTools]] deps = ["Adapt", "ArrayInterface", "ForwardDiff"] -git-tree-sha1 = "64bb68f76f789f5fe5930a80af310f19cdafeaed" +git-tree-sha1 = "b6665214f2d0739f2d09a17474dd443b9139784a" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.17" +version = "0.4.20" [deps.PreallocationTools.extensions] PreallocationToolsReverseDiffExt = "ReverseDiff" @@ -1606,12 +1606,13 @@ version = "0.6.42" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "75bae786dc8b07ec3c2159d578886691823bcb42" +git-tree-sha1 = "850d187a1123683aa7e593d474155e132584fb78" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.23.1" +version = "2.24.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" + SciMLBaseMakieExt = "Makie" SciMLBasePartialFunctionsExt = "PartialFunctions" SciMLBasePyCallExt = "PyCall" SciMLBasePythonCallExt = "PythonCall" @@ -1621,6 +1622,7 @@ version = "2.23.1" [deps.SciMLBase.weakdeps] ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" PartialFunctions = "570af359-4316-4cb7-8c74-252c00c2016b" PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" PythonCall = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d" @@ -1671,15 +1673,17 @@ version = "1.1.0" [[deps.SimpleNonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "470c5f97af31fa35926b45eb01e53a46c8d7d35f" +git-tree-sha1 = "87c13d788c01aba75a66d1129b1a600860ad73a5" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "1.3.1" +version = "1.4.1" [deps.SimpleNonlinearSolve.extensions] + SimpleNonlinearSolveChainRulesCoreExt = "ChainRulesCore" SimpleNonlinearSolvePolyesterForwardDiffExt = "PolyesterForwardDiff" SimpleNonlinearSolveStaticArraysExt = "StaticArrays" [deps.SimpleNonlinearSolve.weakdeps] + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" @@ -1744,9 +1748,9 @@ weakdeps = ["ChainRulesCore"] [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "f295e0a1da4ca425659c57441bcb59abb035a4bc" +git-tree-sha1 = "d2fdac9ff3906e27f7a618d47b676941baa6c80c" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.8.8" +version = "0.8.10" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] @@ -1863,19 +1867,17 @@ uuid = "d1185830-fcd6-423d-90d6-eec64667417b" version = "1.5.0" [[deps.Symbolics]] -deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils"] -git-tree-sha1 = "ab1785cd8cbfa6cc26af3efa491fd241aa69855e" +deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "ForwardDiff", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils"] +git-tree-sha1 = "3cc7df4d9bf8c1e1fb4400c2e73af105dcd2bbb0" uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7" -version = "5.16.1" +version = "5.17.0" [deps.Symbolics.extensions] - SymbolicsForwardDiffExt = "ForwardDiff" SymbolicsGroebnerExt = "Groebner" - SymbolicsPreallocationToolsExt = ["ForwardDiff", "PreallocationTools"] + SymbolicsPreallocationToolsExt = "PreallocationTools" SymbolicsSymPyExt = "SymPy" [deps.Symbolics.weakdeps] - ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" Groebner = "0b43b601-686d-58a3-8a1c-6623616c7cd4" PreallocationTools = "d236fae5-4411-538c-8e31-a6e3d9e00b46" SymPy = "24249f21-da20-56a4-8eb1-6a02cf4ae2e6"