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.gitignore
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.DS_Store
._.DS_Store
bamtools-2.5.1/bin/
bamtools-2.5.1/build/
bamtools-2.5.1/include/
bamtools-2.5.1/lib64/
htslib-1.8/bcf_sr_sort.o
htslib-1.8/bcf_sr_sort.pico
htslib-1.8/bgzf.o
htslib-1.8/bgzf.pico
htslib-1.8/bgzip
htslib-1.8/bgzip.o
htslib-1.8/config.h
htslib-1.8/config.log
htslib-1.8/config.mk
htslib-1.8/config.status
htslib-1.8/cram/cram_codecs.o
htslib-1.8/cram/cram_codecs.pico
htslib-1.8/cram/cram_decode.o
htslib-1.8/cram/cram_decode.pico
htslib-1.8/cram/cram_encode.o
htslib-1.8/cram/cram_encode.pico
htslib-1.8/cram/cram_external.o
htslib-1.8/cram/cram_external.pico
htslib-1.8/cram/cram_index.o
htslib-1.8/cram/cram_index.pico
htslib-1.8/cram/cram_io.o
htslib-1.8/cram/cram_io.pico
htslib-1.8/cram/cram_samtools.o
htslib-1.8/cram/cram_samtools.pico
htslib-1.8/cram/cram_stats.o
htslib-1.8/cram/cram_stats.pico
htslib-1.8/cram/files.o
htslib-1.8/cram/files.pico
htslib-1.8/cram/mFILE.o
htslib-1.8/cram/mFILE.pico
htslib-1.8/cram/open_trace_file.o
htslib-1.8/cram/open_trace_file.pico
htslib-1.8/cram/pooled_alloc.o
htslib-1.8/cram/pooled_alloc.pico
htslib-1.8/cram/rANS_static.o
htslib-1.8/cram/rANS_static.pico
htslib-1.8/cram/sam_header.o
htslib-1.8/cram/sam_header.pico
htslib-1.8/cram/string_alloc.o
htslib-1.8/cram/string_alloc.pico
htslib-1.8/errmod.o
htslib-1.8/errmod.pico
htslib-1.8/faidx.o
htslib-1.8/faidx.pico
htslib-1.8/hfile.o
htslib-1.8/hfile.pico
htslib-1.8/hfile_gcs.o
htslib-1.8/hfile_gcs.pico
htslib-1.8/hfile_libcurl.o
htslib-1.8/hfile_libcurl.pico
htslib-1.8/hfile_net.o
htslib-1.8/hfile_net.pico
htslib-1.8/hfile_s3.o
htslib-1.8/hfile_s3.pico
htslib-1.8/hts.o
htslib-1.8/hts.pico
htslib-1.8/hts_os.o
htslib-1.8/hts_os.pico
htslib-1.8/htsfile
htslib-1.8/htsfile.o
htslib-1.8/htslib.pc.tmp
htslib-1.8/kfunc.o
htslib-1.8/kfunc.pico
htslib-1.8/knetfile.o
htslib-1.8/knetfile.pico
htslib-1.8/kstring.o
htslib-1.8/kstring.pico
htslib-1.8/libhts.a
htslib-1.8/libhts.so
htslib-1.8/libhts.so.2
htslib-1.8/md5.o
htslib-1.8/md5.pico
htslib-1.8/multipart.o
htslib-1.8/multipart.pico
htslib-1.8/probaln.o
htslib-1.8/probaln.pico
htslib-1.8/realn.o
htslib-1.8/realn.pico
htslib-1.8/regidx.o
htslib-1.8/regidx.pico
htslib-1.8/sam.o
htslib-1.8/sam.pico
htslib-1.8/synced_bcf_reader.o
htslib-1.8/synced_bcf_reader.pico
htslib-1.8/tabix
htslib-1.8/tabix.o
htslib-1.8/tbx.o
htslib-1.8/tbx.pico
htslib-1.8/test/fieldarith
htslib-1.8/test/fieldarith.o
htslib-1.8/test/hfile
htslib-1.8/test/hfile.o
htslib-1.8/test/hts_endian
htslib-1.8/test/hts_endian.o
htslib-1.8/test/sam
htslib-1.8/test/sam.o
htslib-1.8/test/test-bcf-sr
htslib-1.8/test/test-bcf-sr.o
htslib-1.8/test/test-bcf-translate
htslib-1.8/test/test-bcf-translate.o
htslib-1.8/test/test-regidx
htslib-1.8/test/test-regidx.o
htslib-1.8/test/test-vcf-api
htslib-1.8/test/test-vcf-api.o
htslib-1.8/test/test-vcf-sweep
htslib-1.8/test/test-vcf-sweep.o
htslib-1.8/test/test_bgzf
htslib-1.8/test/test_bgzf.o
htslib-1.8/test/test_realn
htslib-1.8/test/test_realn.o
htslib-1.8/test/test_view
htslib-1.8/test/test_view.o
htslib-1.8/textutils.o
htslib-1.8/textutils.pico
htslib-1.8/thread_pool.o
htslib-1.8/thread_pool.pico
htslib-1.8/vcf.o
htslib-1.8/vcf.pico
htslib-1.8/vcf_sweep.o
htslib-1.8/vcf_sweep.pico
htslib-1.8/vcfutils.o
htslib-1.8/vcfutils.pico
htslib-1.8/version.h
lancet
src/lancet