Adding missing imports

oborel · Oct 23, 2018 · 986574b · 986574b
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diff --git a/other_import.owl b/other_import.owl
@@ -0,0 +1,395 @@
+<?xml version="1.0"?>
+<rdf:RDF xmlns="http://purl.obolibrary.org/obo/ro/other_import.owl#"
+     xml:base="http://purl.obolibrary.org/obo/ro/other_import.owl"
+     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
+     xmlns:owl="http://www.w3.org/2002/07/owl#"
+     xmlns:xml="http://www.w3.org/XML/1998/namespace"
+     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
+     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
+     xmlns:obo="http://purl.obolibrary.org/obo/"
+     xmlns:dc="http://purl.org/dc/elements/1.1/">
+    <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/ro/other_import.owl">
+        <rdfs:comment>This should be split into sub-modules</rdfs:comment>
+        <dc:title>ad-hoc additional imports</dc:title>
+    </owl:Ontology>
+
+
+
+    <!-- 
+    ///////////////////////////////////////////////////////////////////////////////////////
+    //
+    // Annotation properties
+    //
+    ///////////////////////////////////////////////////////////////////////////////////////
+     -->
+
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000114 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000136 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000136"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000412 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000412"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000589 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000589">
+        <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+        <rdfs:label xml:lang="en">OBO foundry unique label</rdfs:label>
+    </owl:AnnotationProperty>
+
+
+
+    <!-- 
+    ///////////////////////////////////////////////////////////////////////////////////////
+    //
+    // Object Properties
+    //
+    ///////////////////////////////////////////////////////////////////////////////////////
+     -->
+
+
+
+
+    <!-- http://purl.obolibrary.org/obo/RO_0002207 -->
+
+    <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002207"/>
+
+
+
+    <!-- 
+    ///////////////////////////////////////////////////////////////////////////////////////
+    //
+    // Classes
+    //
+    ///////////////////////////////////////////////////////////////////////////////////////
+     -->
+
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000015 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000016 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000019 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000019"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000020 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000020"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000040 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000141 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000141"/>
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0000000 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000000">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0030000"/>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
+        <rdfs:label xml:lang="en">anatomical entity</rdfs:label>
+    </owl:Class>
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0000003 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000003">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000006"/>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
+        <rdfs:label xml:lang="en">connected anatomical structure</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0000006 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000006">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000000"/>
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
+        <rdfs:label xml:lang="en">material anatomical entity</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0000007 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000007">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000141"/>
+        <rdfs:label>immaterial anatomical entity</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0000011 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000011">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0010000"/>
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002577"/>
+        <rdfs:label>connected anatomical system</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0000014 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000014">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000003"/>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
+        <obo:IAO_0000589>cell part (CARO)</obo:IAO_0000589>
+        <rdfs:label xml:lang="en">cell part</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0001000 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0001000">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000003"/>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
+        <rdfs:label xml:lang="en">multi-cell-part structure</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0001001 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0001001">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0001000"/>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
+        <rdfs:label xml:lang="en">neuron projection bundle</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0001010 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0001010">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">organism or virus or viroid</rdfs:label>
+    </owl:Class>
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0030000 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0030000">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">biological entity</rdfs:label>
+    </owl:Class>
+
+
+    <!-- http://purl.obolibrary.org/obo/CARO_0010000 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0010000">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000003"/>
+        <rdfs:subClassOf>
+            <owl:Restriction>
+                <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002207"/>
+                <owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CARO_0010000"/>
+            </owl:Restriction>
+        </rdfs:subClassOf>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">multicellular anatomical structure</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CL_0000000 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CL_0000000">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000003"/>
+        <rdfs:subClassOf>
+            <owl:Restriction>
+                <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002207"/>
+                <owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CL_0000000"/>
+            </owl:Restriction>
+        </rdfs:subClassOf>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
+        <rdfs:label xml:lang="en">cell</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/CL_0000540 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CL_0000540">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CL_0000000"/>
+        <obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
+        <rdfs:label xml:lang="en">neuron</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/ENVO_00000428 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_00000428">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ENVO_01000254"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">biome</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/ENVO_01000254 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_01000254">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002577"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">environmental system</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/GO_0003674 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0003674">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
+        <obo:IAO_0000589>molecular process</obo:IAO_0000589>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/OGMS_0000031 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/OGMS_0000031">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
+        <obo:IAO_0000115 xml:lang="en">A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.</obo:IAO_0000115>
+        <rdfs:label>disease</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/PATO_0000001 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000001">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
+        <obo:IAO_0000589>quality (PATO)</obo:IAO_0000589>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/PATO_0000051 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000051">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/PATO_0000052 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000052">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PATO_0000051"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">shape</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/PATO_0000402 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000402">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PATO_0002009"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">branched</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/PATO_0002009 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0002009">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PATO_0000052"/>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">branchiness</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/RO_0002577 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/RO_0002577"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/UPHENO_0001001 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/UPHENO_0001001">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PATO_0000001"/>
+        <rdfs:label xml:lang="en">phenotype</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- 
+    ///////////////////////////////////////////////////////////////////////////////////////
+    //
+    // Annotations
+    //
+    ///////////////////////////////////////////////////////////////////////////////////////
+     -->
+
+    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000078">
+        <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+        <rdfs:label xml:lang="en">curation status specification</rdfs:label>
+    </rdf:Description>
+    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000122">
+        <rdfs:label xml:lang="en">ready for release</rdfs:label>
+        <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+    </rdf:Description>
+    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000125">
+        <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+        <rdfs:label xml:lang="en">pending final vetting</rdfs:label>
+    </rdf:Description>
+    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000225">
+        <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+        <rdfs:label xml:lang="en">obsolescence reason specification</rdfs:label>
+    </rdf:Description>
+    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000428">
+        <rdfs:label xml:lang="en">requires discussion</rdfs:label>
+        <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+    </rdf:Description>
+    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0100001">
+        <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+        <rdfs:label xml:lang="en">term replaced by</rdfs:label>
+    </rdf:Description>
+</rdf:RDF>
+
+
+
+<!-- Generated by the OWL API (version 4.2.8.20170104-2310) https://github.com/owlcs/owlapi -->
+