Version 1.8.0-alpha

• alpha release for evaluation and testing of replacing R scripts with Python
• Incorporates recent changes from the release-1.7.8 branch
• This and subsequent pre-releases of 1.8.0 will be tagged on the release-1.8.0 branch

What's Changed

• Dev gcgi 1378 new gsicapbench inputs by @iainrb in #486
• Update 1.7.8 with latest changes from main by @iainrb in #492
• Add new JSON diff script and tests by @iainrb in #493
• Dev mcgill r2python by @MareikeJaniak in #460
• Gcgi 1472 grab all patient ids by @AqsaAlam in #495
• Allowed tumour and normal ids to be manually specified for provenance helper by @AqsaAlam in #496
• Added oncokb definitions to 40x assays by @AqsaAlam in #497
• Dev-GCGI-1446_fusion-total by @OumaimaHamza in #498
• Dev mcgill purple by @MareikeJaniak in #476

New Contributors

• @MareikeJaniak made their first contribution in #460

Full Changelog: v1.7.7...v1.8.0-alpha