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Currently, if all masks have no Z or T index, the omero zarr masks Image:ID exports a label data block with size-Z or size-T = 1. However, this relies on all other clients to interpret this in the same way that OMERO does (to display that label image across all Z/T indices).
Instead, it it better to export a better representation of how we want the data to appear. If a Mask should apply across all Z or T planes, then we should export a Label that spans all those Z/T planes.
I am unaware of any provision in the Zarr specification or the NGFF spec to handle these types of scenarios and re-use existing chunks for other indices
See #82 (comment)
Currently, if all masks have no Z or T index, the
omero zarr masks Image:ID
exports a label data block with size-Z or size-T = 1. However, this relies on all other clients to interpret this in the same way that OMERO does (to display that label image across all Z/T indices).Instead, it it better to export a better representation of how we want the data to appear. If a Mask should apply across all Z or T planes, then we should export a Label that spans all those Z/T planes.
cc @pwalczysko
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