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Update events, HDBI, CGR
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,46 @@ | ||
| --- | ||
| layout: news-events | ||
| filename: events | ||
| title: November 2023 OME workshop | ||
| main-blurb: The OME Team gives a workshop on OMERO at the Centre for Genomic Regulation (CRG), Barcelona. | ||
| --- | ||
| <hr class="whitespace"> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Organisers: <a href="https://www.crg.eu/en" target="_blank">Centre for Genomic Regulation, Barcelona.</a></h2> | ||
| </div> | ||
| </div> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Location: Centre for Genomic Regulation (CRG), Barcelona. | ||
| </div> | ||
| </div> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Workshop: <a href="https://www.crg.eu/en/event/coursescrg-omero-workshop" target="_blank">OMERO workshop.</a></h2> | ||
| </div> | ||
| </div> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Dates: 7 - 8 November 2023</h2> | ||
| </div> | ||
| </div> | ||
| <hr class="whitespace"> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <p class="event-day-description">OMERO, a component of OME, is a software platform for image data management and analysis which will be presented in this workshop. | ||
| Import, organisation, viewing, searching, annotation and publishing of imaging data with OMERO will be shown.</p> | ||
| <p class="event-day-description"> | ||
| Further, the emphasis will be given on the popular OMERO.figure application. | ||
| </p> | ||
| <p class="event-day-description"> | ||
| During the second day, we will be concentrating on more advanced OMERO topics, showing connections of OMERO with popular 3rd party image analysis software packages such as Fiji, Cellprofiler, R, Python and using OMERO Python API for running image analysis on the cloud. | ||
| </p> | ||
| </div> | ||
| </div> | ||
| <hr class="whitespace"> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Resources available: TBD</h2> | ||
| </div> | ||
| </div> |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,49 @@ | ||
| --- | ||
| layout: news-events | ||
| filename: events | ||
| title: September 2023 OME workshop | ||
| main-blurb: The OME Team gave a workshop on OMERO/IDR as part of HDBI Day-symposium (hosted at the Francis Crick Institute, London). | ||
| --- | ||
| <hr class="whitespace"> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Organisers: <a href="https://hdbi.org/" target="_blank">Human Developmental Biology Initiative (HDBI)</a></h2> | ||
| </div> | ||
| </div> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Location: The Francis Crick Institute, London | ||
| </div> | ||
| </div> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Workshop: OMERO/IDR Workshop</h2> | ||
| </div> | ||
| </div> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Duration: 2 x 1 hour</h2> | ||
| </div> | ||
| </div> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Date: 12 September 2023</h2> | ||
| </div> | ||
| </div> | ||
| <hr class="whitespace"> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <p class="event-day-description">OMERO, a component of OME, is a software platform for image data management and analysis which was presented in this course. | ||
| Import, organisation, viewing and annotation of imaging data with OMERO were shown.</p> | ||
| <p class="event-day-description"> | ||
| During the second hour, the Image Data Resource (IDR) was introduced, concentrating on the submission workflow and explaining the value of curation for this added-value resource. | ||
| We also showed the transition from manual import of images and metadata to importing in bulk using text templates and the Command Line Interface. | ||
| </p> | ||
| </div> | ||
| </div> | ||
| <hr class="whitespace"> | ||
| <div class="row"> | ||
| <div class="column"> | ||
| <h2 class="event-day">Resources available: <a href="https://downloads.openmicroscopy.org/presentations/2023/HDBI-Crick/" target="_blank">2 presentations and a walkthrough</a></h2> | ||
| </div> | ||
| </div> |