Reorganised package contents to ensure that R CMD built completes qui…

…ckly.
oncoray · Sep 11, 2024 · 71d793e · 71d793e
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diff --git a/.gitignore b/.gitignore
@@ -19,7 +19,7 @@
 /*.Rcheck/
 
 # RStudio files
-.Rproj.user/
+R/.Rproj.user/
 
 # produced vignettes
 vignettes/*.html

diff --git a/.Rbuildignore → R/.Rbuildignore b/.Rbuildignore → R/.Rbuildignore
@@ -5,6 +5,6 @@
 ^LICENSE\.txt$
 ^NEWS$
 ^cran-comments\.md$
-^manuscript
+^manuscript$
 ^icon$
 ^\.github$
diff --git a/.lintr → R/.lintr b/.lintr → R/.lintr
diff --git a/DESCRIPTION → R/DESCRIPTION b/DESCRIPTION → R/DESCRIPTION
@@ -11,13 +11,13 @@ Authors@R:
       person("German Cancer Research Center (DKFZ)", role="cph")
     )
 Description:
-  Location- and scale-invariant Box-Cox and Yeo-Johnson power transformations
-  allow for transforming variables with distributions distant from 0 to
-  normality. Transformers are implemented as S4 objects. These allow for
-  transforming new instances to normality after optimising fitting parameters on 
-  other data. A test for central normality allows for rejecting transformations
-  that fail to produce a suitably normal distribution, independent of sample 
-  number.
+    Location- and scale-invariant Box-Cox and Yeo-Johnson power transformations
+    allow for transforming variables with distributions distant from 0 to
+    normality. Transformers are implemented as S4 objects. These allow for
+    transforming new instances to normality after optimising fitting parameters
+    on other data. A test for central normality allows for rejecting 
+    transformations that fail to produce a suitably normal distribution, 
+    independent of sample number.
 URL: https://github.com/oncoray/power.transform
 BugReports: https://github.com/oncoray/power.transform/issues
 License: EUPL

diff --git a/LICENSE.txt → R/LICENSE.txt b/LICENSE.txt → R/LICENSE.txt
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diff --git a/man/transformationPowerTransform-class.Rd → R/man/transformationPowerTransform-class.Rd b/man/transformationPowerTransform-class.Rd → R/man/transformationPowerTransform-class.Rd
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diff --git a/man/transformation_yeo_johnson.Rd → R/man/transformation_yeo_johnson.Rd b/man/transformation_yeo_johnson.Rd → R/man/transformation_yeo_johnson.Rd
diff --git a/power.transform.Rproj → R/power.transform.Rproj b/power.transform.Rproj → R/power.transform.Rproj
diff --git a/tests/testthat.R → R/tests/testthat.R b/tests/testthat.R → R/tests/testthat.R
diff --git a/tests/testthat/test-accessors-mutators.R → R/tests/testthat/test-accessors-mutators.R b/tests/testthat/test-accessors-mutators.R → R/tests/testthat/test-accessors-mutators.R
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