Removed more old parsers.

Author: markus1978

.gitmodules

@@ -1,11 +1,3 @@
-[submodule "dependencies/parsers/mpes"]
-	path = dependencies/parsers/mpes
-	url = https://github.com/nomad-coe/nomad-parser-mpes.git
-	branch = master
-[submodule "dependencies/parsers/aptfim"]
-	path = dependencies/parsers/aptfim
-	url = https://github.com/nomad-coe/nomad-parser-aptfim.git
-	branch = master
 [submodule "dependencies/materia"]
 	path = gui/materia
 	url = https://github.com/nomad-coe/materia
@@ -19,9 +11,6 @@
 [submodule "dependencies/parsers/example"]
 	path = dependencies/parsers/example
 	url = https://github.com/nomad-coe/nomad-parser-example.git
-[submodule "dependencies/parsers/xps"]
-	path = dependencies/parsers/xps
-	url = https://github.com/nomad-coe/nomad-parser-xps.git
 [submodule "dependencies/nomad-remote-tools-hub"]
 	path = dependencies/nomad-remote-tools-hub
 	url = https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-remote-tools-hub.git

dependencies/parsers/aptfim

@@ -25,12 +25,8 @@
 from .parser import MissingParser, BrokenParser, Parser, ArchiveParser, MatchingParserInterface
 from .artificial import EmptyParser, GenerateRandomParser, TemplateParser, ChaosParser
 
-from xpsparser import XPSParser
 from eelsdbparser import EELSDBParser
 from nexusparser import NexusParser
-# TODO
-# from mpesparser import MPESParser
-# from aptfimparser import APTFIMParser
 
 try:
     # these packages are not available without parsing extra, which is ok, if the
@@ -490,10 +486,7 @@ def match_parser(mainfile_path: str, strict=True) -> Parser:
         name='parsers/phonopy', code_name='Phonopy', code_homepage='https://phonopy.github.io/phonopy/',
         mainfile_name_re=(r'(.*/phonopy-FHI-aims-displacement-0*1/control.in$)|(.*/phon.+yaml)')
     ),
-    # MPESParser(),
-    # APTFIMParser(),
     EELSDBParser(),
-    XPSParser(),
     NexusParser(),
     ArchiveParser()
 ]

dependencies/parsers/mpes

@@ -70,15 +70,12 @@
     ('parsers/qbox', 'tests/data/parsers/qbox/01_h2ogs.r'),
     ('parser/onetep', 'tests/data/parsers/onetep/fluor/12-difluoroethane.out'),
     ('parsers/eels', 'tests/data/parsers/eels.json'),
-    ('parsers/xps', 'tests/data/parsers/xps/multiple_channels.xy'),
     ('parsers/lobster', 'tests/data/parsers/lobster/NaCl/lobsterout'),
     ('parsers/aflow', 'tests/data/parsers/aflow/Ag1Co1O2_ICSD_246157/aflowlib.json'),
     ('parsers/mp', 'tests/data/parsers/mp/mp-1/materials.json'),
     ('parsers/asr', 'tests/data/parsers/asr/archive_ccdc26c4f32546c5a00ad03a093b73dc.json'),
     ('parsers/psi4', 'tests/data/parsers/psi4/adc1/output.ref'),
     ('parsers/yambo', 'tests/data/parsers/yambo/hBN/r-10b_1Ry_HF_and_locXC_gw0_em1d_ppa'),
-    # ('parsers/aptfim', 'tests/data/parsers/aptfim.aptfim'),
-    # ('parsers/mpes', 'tests/data/parsers/mpes.meta'),
     ('parsers/archive', 'tests/data/parsers/archive.json')
 ]
 
@@ -90,7 +87,7 @@
         fixed_parser_examples.append((parser, mainfile))
 parser_examples = fixed_parser_examples
 
-correct_num_output_files = 123
+correct_num_output_files = 122
 
 
 def create_reference(data, pretty):

dependencies/parsers/xps

@@ -655,8 +655,8 @@ def test_ems_data(proc_infra, test_user):
     upload = run_processing(('test_ems_upload', 'tests/data/proc/examples_ems.zip'), test_user)
 
     additional_keys = ['results.method.method_name', 'results.material.elements']
-    assert upload.total_entries_count == 2
-    assert len(upload.successful_entries) == 2
+    assert upload.total_entries_count == 1
+    assert len(upload.successful_entries) == 1
 
     with upload.entries_metadata() as entries:
         assert_upload_files(upload.upload_id, entries, StagingUploadFiles, published=False)