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CHANGELOG.md

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#Release v1.1.0

  • OG-923: Update CHANGELOG.md
  • OG-923: Add CONTRIBUTING.md
  • OG-923: Add script for changelog generation

#Release v1.0.0

  • 155: Fix. When deleting an organism line, all experiments with this line are deleted
  • 152: Fix genotype deletion bug from CMS
  • 146: Change id to UUID for manually set hallmarks of aging
  • 128: Fix the checkbox in pink forms that incorrectly reflected the value of the "significant" field in the study
  • 142: get-go-terms script rework
  • Add an updated criteria dataset, change keys in the method
  • 134: Add functionality for manually linking hallmarks of aging with genes when there is no proper category in GO
  • Add an updated criteria dataset with missing genes
  • 136: Add foreign keys to a table aging mechanism
  • 107: Delete columns in the 'gene' table
  • OG-924: Change gene symbols from alias to HGNC
  • 130: Fix duplicates in the parsed GO Terms
  • 86: Add values to genes' source column in a database
  • 103: Set a selection criterion for every gene in a database
  • 93: Parse data, compile a dataset, and add data into the database for the studies on age-related changes in gene expression, methylation, or protein activity
  • 82: Set proper names for dataset and database columns
  • Add data on physical activity, copy experiments to orthologs, and add data on age-related changes in expression
  • 76: change type column p_value in age_releated_change table
  • 73 Fix bug in form validation organizm_line_id
  • 69: Add genes that were not included in a database after an attempt to add them from a dataset
  • 63: Fix query that caused an error when navigating to the "/intervention-result" page
  • OG-780: Fix. Polymorphism could not be added to the pink form in the field "allelic polymorphism"
  • OG-803: Parser for batch add genes to a database
  • OG-839: Fix up dropdown menus height and scrolling
  • OG-589: Add new fields to a pink form (studies on the association of gene variants or expression levels with longevity)
  • OG-686: Remove obsolete fields from lifespan_experimment (studies on the effect of gene activity change on a lifespan) in DB
  • OG-376: Add new fields to blue ("Age-related changes in the gene expression or protein activity") form
  • OG-720: Get age units for forms from a database
  • OG-640: Let set "improves" and "deteriorates" for the same process in studies
  • OG-712: Fix purple form (studies on the effect of gene activity change on a lifespan) preview
  • OG-708: Prevent loading all the forms on a gene studies page simultaneously
  • OG-689: Link chromosome data to gene
  • OG-675: Add data on calorie restriction diet and longevity
  • OG-622: Fix layout template for purple form (studies on the effect of gene activity change on a lifespan)
  • OG-621: Purple form (studies on the effect of gene activity change on a lifespan) visibility conditions
  • OG-658: Add indeces to gene table
  • OG-656 Add gene location on chromosome
  • OG-623 Add gene relations to the intervention methods in the experiments on the effect of gene activity change on a lifespan
  • OG-610: Link human genes to orthologs in flies and mice
  • Add a new structure for storing orthologs in the database
  • Add new fields to the study of the effect of gene activity modulation on the aging process
  • Add functionality for editing the existing genotypes
  • Add a text field for the therapy description in studies of the effect of gene activity modulation on life expectancy
  • Parse flybase_id fields from the Flybase database for gene orthologs
  • Link human genes, model animal orthologs, and experiment entities in a database
  • Fixe display of experiment conditions
  • Develop new functionality for editing studies
  • License project under the MPL v. 2.0.
  • OG-539: Implement a new structure for orthologs in a database
  • OG-539: Orthologs parsing
  • OG-539: Add Latin name to model organism