From 8cd5379dcdd441ebbc99f46249ec4e936b529e3e Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Wed, 19 Apr 2023 16:46:46 +0200
Subject: [PATCH 01/12] Prepare new development branch release-4.8.x

---
 .github/workflows/test-analysis.yml                 | 2 +-
 commons-datastore/commons-datastore-core/pom.xml    | 2 +-
 commons-datastore/commons-datastore-mongodb/pom.xml | 2 +-
 commons-datastore/commons-datastore-solr/pom.xml    | 2 +-
 commons-datastore/pom.xml                           | 2 +-
 commons-lib/pom.xml                                 | 2 +-
 pom.xml                                             | 2 +-
 7 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/.github/workflows/test-analysis.yml b/.github/workflows/test-analysis.yml
index 63810e67..84b68c79 100644
--- a/.github/workflows/test-analysis.yml
+++ b/.github/workflows/test-analysis.yml
@@ -20,7 +20,7 @@ on:
         type: string
         required: true
 env:
-  xb_version: "1.7.0"
+  xb_version: "1.6.1"
 jobs:
   test:
     name: Test and push Sonar analysis
diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index cb43ba3e..08b93cba 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.9.0-SNAPSHOT</version>
+        <version>4.8.1-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index 01bbebad..c908027a 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.9.0-SNAPSHOT</version>
+        <version>4.8.1-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/commons-datastore-solr/pom.xml b/commons-datastore/commons-datastore-solr/pom.xml
index 5658bbb4..341efb5e 100644
--- a/commons-datastore/commons-datastore-solr/pom.xml
+++ b/commons-datastore/commons-datastore-solr/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.9.0-SNAPSHOT</version>
+        <version>4.8.1-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/pom.xml b/commons-datastore/pom.xml
index 3e93d95f..35ef4a5b 100644
--- a/commons-datastore/pom.xml
+++ b/commons-datastore/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons</artifactId>
-        <version>4.9.0-SNAPSHOT</version>
+        <version>4.8.1-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index 78ee15c1..bfc377a5 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons</artifactId>
-        <version>4.9.0-SNAPSHOT</version>
+        <version>4.8.1-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/pom.xml b/pom.xml
index 708c496a..522fc4e3 100644
--- a/pom.xml
+++ b/pom.xml
@@ -6,7 +6,7 @@
 
     <groupId>org.opencb.commons</groupId>
     <artifactId>commons</artifactId>
-    <version>4.9.0-SNAPSHOT</version>
+    <version>4.8.1-SNAPSHOT</version>
     <packaging>pom</packaging>
 
     <name>OpenCB commons project</name>

From 6c36dfdeb69844a1b5a46a4e6e13ee4fb7b92a2b Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Wed, 19 Apr 2023 16:51:47 +0200
Subject: [PATCH 02/12] Prepare release xb_version 1.7.0

---
 .github/workflows/release.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
index f83c634b..42013c00 100644
--- a/.github/workflows/release.yml
+++ b/.github/workflows/release.yml
@@ -10,7 +10,7 @@ jobs:
     uses: ./.github/workflows/build-java-app-workflow.yml
 
   test:
-    uses: ./.github/workflows/test-analysis.yml@release-4.7.x
+    uses: ./.github/workflows/test-analysis.yml
     needs: build
     secrets: inherit
     with:

From bf720428415b479f90e792b37b43fa162f96c742 Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Thu, 4 May 2023 15:31:51 +0200
Subject: [PATCH 03/12] Dependency analysis

---
 .../commons-datastore-core/pom.xml            | 15 +++++----
 .../commons-datastore-mongodb/pom.xml         | 29 ++++++++++++++++-
 .../commons-datastore-solr/pom.xml            | 20 ++++++++----
 commons-lib/pom.xml                           | 12 ++++---
 pom.xml                                       | 32 +++++++++++++++++--
 5 files changed, 86 insertions(+), 22 deletions(-)

diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index 08b93cba..b862bb79 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -22,19 +22,20 @@
             <groupId>org.apache.commons</groupId>
             <artifactId>commons-lang3</artifactId>
         </dependency>
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-api</artifactId>
-        </dependency>
+
         <dependency>
             <groupId>junit</groupId>
             <artifactId>junit</artifactId>
             <scope>test</scope>
         </dependency>
-        <dependency>
+        <!--  <dependency>
             <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <scope>test</scope>
+            <artifactId>slf4j-api</artifactId>
         </dependency>
+        <dependency>
+             <groupId>org.slf4j</groupId>
+             <artifactId>slf4j-simple</artifactId>
+             <scope>test</scope>
+         </dependency>-->
     </dependencies>
 </project>
\ No newline at end of file
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index c908027a..65db1dc9 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -31,9 +31,36 @@
         </dependency>
         <dependency>
             <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
+            <artifactId>slf4j-api</artifactId>
+        </dependency>
+        <dependency>
+            <groupId>org.apache.commons</groupId>
+            <artifactId>commons-lang3</artifactId>
+            <version>${apache.commons.lang3.version}</version>
+        </dependency>
+        <dependency>
+            <groupId>org.hamcrest</groupId>
+            <artifactId>hamcrest-core</artifactId>
+            <version>${hamcrest.version}</version>
             <scope>test</scope>
         </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-databind</artifactId>
+            <version>${jackson.version}</version>
+        </dependency>
+        <dependency>
+            <groupId>org.mongodb</groupId>
+            <artifactId>bson</artifactId>
+            <version>${bson.version}</version>
+            <scope>compile</scope>
+        </dependency>
+        <dependency>
+            <groupId>org.mongodb</groupId>
+            <artifactId>mongodb-driver-core</artifactId>
+            <version>${bson.version}</version>
+            <scope>compile</scope>
+        </dependency>
     </dependencies>
 
 </project>
\ No newline at end of file
diff --git a/commons-datastore/commons-datastore-solr/pom.xml b/commons-datastore/commons-datastore-solr/pom.xml
index 341efb5e..b06bfe35 100644
--- a/commons-datastore/commons-datastore-solr/pom.xml
+++ b/commons-datastore/commons-datastore-solr/pom.xml
@@ -34,21 +34,27 @@
             <groupId>org.opencb.commons</groupId>
             <artifactId>commons-datastore-core</artifactId>
         </dependency>
-
         <dependency>
             <groupId>org.apache.solr</groupId>
             <artifactId>solr-solrj</artifactId>
             <version>8.8.2</version>
         </dependency>
         <dependency>
-            <groupId>junit</groupId>
-            <artifactId>junit</artifactId>
-            <scope>test</scope>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-api</artifactId>
+            <scope>compile</scope>
         </dependency>
         <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <scope>test</scope>
+            <groupId>org.apache.commons</groupId>
+            <artifactId>commons-lang3</artifactId>
+            <version>${apache.commons.lang3.version}</version>
+        </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-databind</artifactId>
         </dependency>
+
     </dependencies>
+
+
 </project>
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index bfc377a5..b3d44098 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -28,6 +28,13 @@
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
             <artifactId>jackson-databind</artifactId>
+            <scope>test</scope>
+        </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-core</artifactId>
+            <version>${jackson.version}</version>
+            <scope>test</scope>
         </dependency>
         <dependency>
             <groupId>org.slf4j</groupId>
@@ -56,10 +63,5 @@
             <artifactId>junit</artifactId>
             <scope>provided</scope>
         </dependency>
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <scope>test</scope>
-        </dependency>
     </dependencies>
 </project>
diff --git a/pom.xml b/pom.xml
index 522fc4e3..b700a72b 100644
--- a/pom.xml
+++ b/pom.xml
@@ -23,10 +23,10 @@
         <apache.commons.lang3.version>3.12.0</apache.commons.lang3.version>
         <slf4j.version>1.7.32</slf4j.version>
         <avro.version>1.7.7</avro.version>
-
+        <hamcrest.version>1.3</hamcrest.version>
+        <bson.version>4.8.2</bson.version>
         <sonar.organization>opencb</sonar.organization>
         <sonar.host.url>https://sonarcloud.io</sonar.host.url>
-
         <maven.compiler.source>1.8</maven.compiler.source>
         <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
     </properties>
@@ -110,6 +110,11 @@
                 <artifactId>jackson-databind</artifactId>
                 <version>${jackson.version}</version>
             </dependency>
+            <dependency>
+                <groupId>com.fasterxml.jackson.core</groupId>
+                <artifactId>jackson-core</artifactId>
+                <version>${jackson.version}</version>
+            </dependency>
             <dependency>
                 <groupId>org.apache.commons</groupId>
                 <artifactId>commons-lang3</artifactId>
@@ -141,6 +146,13 @@
         </dependencies>
     </dependencyManagement>
 
+    <dependencies>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-core</artifactId>
+        </dependency>
+    </dependencies>
+
     <build>
         <sourceDirectory>src/main/java</sourceDirectory>
         <testSourceDirectory>src/test/java</testSourceDirectory>
@@ -223,6 +235,22 @@
                     </execution>
                 </executions>
             </plugin>
+            <plugin>
+                <groupId>org.apache.maven.plugins</groupId>
+                <artifactId>maven-dependency-plugin</artifactId>
+                <version>3.5.0</version>
+                <executions>
+                    <execution>
+                        <id>analyze</id>
+                        <goals>
+                            <goal>analyze-only</goal>
+                        </goals>
+                        <configuration>
+                            <failOnWarning>true</failOnWarning>
+                        </configuration>
+                    </execution>
+                </executions>
+            </plugin>
         </plugins>
     </build>
 

From c0ada4d2ce50f9c36bed60d938c720af485733bc Mon Sep 17 00:00:00 2001
From: imedina <igmecas@gmail.com>
Date: Thu, 4 May 2023 15:00:44 +0100
Subject: [PATCH 04/12] pom: several cleanups

---
 .../commons-datastore-core/pom.xml            | 17 +++----
 .../commons-datastore-mongodb/pom.xml         | 47 +++++++++----------
 .../commons-datastore-solr/pom.xml            | 15 +++---
 commons-datastore/pom.xml                     |  9 ----
 commons-lib/pom.xml                           | 18 ++++---
 pom.xml                                       | 36 +++++++-------
 6 files changed, 63 insertions(+), 79 deletions(-)

diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index b862bb79..15f79f58 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -14,6 +14,10 @@
     <packaging>jar</packaging>
 
     <dependencies>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-core</artifactId>
+        </dependency>
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
             <artifactId>jackson-databind</artifactId>
@@ -22,20 +26,11 @@
             <groupId>org.apache.commons</groupId>
             <artifactId>commons-lang3</artifactId>
         </dependency>
-
         <dependency>
             <groupId>junit</groupId>
             <artifactId>junit</artifactId>
             <scope>test</scope>
         </dependency>
-        <!--  <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-api</artifactId>
-        </dependency>
-        <dependency>
-             <groupId>org.slf4j</groupId>
-             <artifactId>slf4j-simple</artifactId>
-             <scope>test</scope>
-         </dependency>-->
     </dependencies>
-</project>
\ No newline at end of file
+
+</project>
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index 65db1dc9..6cccf7f6 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -19,48 +19,47 @@
             <artifactId>commons-datastore-core</artifactId>
         </dependency>
 
+        <dependency>
+            <groupId>org.mongodb</groupId>
+            <artifactId>mongodb-driver-core</artifactId>
+            <version>${mongodb.version}</version>
+        </dependency>
         <dependency>
             <groupId>org.mongodb</groupId>
             <artifactId>mongodb-driver-sync</artifactId>
-            <version>4.8.2</version>
+            <version>${mongodb.version}</version>
         </dependency>
         <dependency>
-            <groupId>junit</groupId>
-            <artifactId>junit</artifactId>
-            <scope>test</scope>
+            <groupId>org.mongodb</groupId>
+            <artifactId>bson</artifactId>
+            <version>${mongodb.version}</version>
         </dependency>
         <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-api</artifactId>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-core</artifactId>
+        </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-databind</artifactId>
         </dependency>
         <dependency>
             <groupId>org.apache.commons</groupId>
             <artifactId>commons-lang3</artifactId>
-            <version>${apache.commons.lang3.version}</version>
+        </dependency>
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-api</artifactId>
         </dependency>
         <dependency>
             <groupId>org.hamcrest</groupId>
             <artifactId>hamcrest-core</artifactId>
-            <version>${hamcrest.version}</version>
             <scope>test</scope>
         </dependency>
         <dependency>
-            <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-databind</artifactId>
-            <version>${jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.mongodb</groupId>
-            <artifactId>bson</artifactId>
-            <version>${bson.version}</version>
-            <scope>compile</scope>
-        </dependency>
-        <dependency>
-            <groupId>org.mongodb</groupId>
-            <artifactId>mongodb-driver-core</artifactId>
-            <version>${bson.version}</version>
-            <scope>compile</scope>
+            <groupId>junit</groupId>
+            <artifactId>junit</artifactId>
+            <scope>test</scope>
         </dependency>
     </dependencies>
 
-</project>
\ No newline at end of file
+</project>
diff --git a/commons-datastore/commons-datastore-solr/pom.xml b/commons-datastore/commons-datastore-solr/pom.xml
index b06bfe35..e5d4c781 100644
--- a/commons-datastore/commons-datastore-solr/pom.xml
+++ b/commons-datastore/commons-datastore-solr/pom.xml
@@ -34,27 +34,24 @@
             <groupId>org.opencb.commons</groupId>
             <artifactId>commons-datastore-core</artifactId>
         </dependency>
+
         <dependency>
             <groupId>org.apache.solr</groupId>
             <artifactId>solr-solrj</artifactId>
-            <version>8.8.2</version>
+            <version>${solr.version}</version>
         </dependency>
         <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-api</artifactId>
-            <scope>compile</scope>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-databind</artifactId>
         </dependency>
         <dependency>
             <groupId>org.apache.commons</groupId>
             <artifactId>commons-lang3</artifactId>
-            <version>${apache.commons.lang3.version}</version>
         </dependency>
         <dependency>
-            <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-databind</artifactId>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-api</artifactId>
         </dependency>
-
     </dependencies>
 
-
 </project>
diff --git a/commons-datastore/pom.xml b/commons-datastore/pom.xml
index 35ef4a5b..964439c5 100644
--- a/commons-datastore/pom.xml
+++ b/commons-datastore/pom.xml
@@ -19,13 +19,4 @@
         <module>commons-datastore-solr</module>
     </modules>
 
-    <dependencyManagement>
-        <dependencies>
-            <dependency>
-                <groupId>org.opencb.commons</groupId>
-                <artifactId>commons-datastore-core</artifactId>
-                <version>${project.parent.version}</version>
-            </dependency>
-        </dependencies>
-    </dependencyManagement>
 </project>
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index b3d44098..b4f0f121 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -17,25 +17,27 @@
         <dependency>
             <groupId>org.opencb.commons</groupId>
             <artifactId>commons-datastore-core</artifactId>
-            <version>${project.parent.version}</version>
-            <scope>compile</scope>
         </dependency>
+
         <dependency>
             <groupId>com.beust</groupId>
             <artifactId>jcommander</artifactId>
-            <version>1.69</version>
+            <version>${jcommander.version}</version>
         </dependency>
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-databind</artifactId>
+            <artifactId>jackson-core</artifactId>
             <scope>test</scope>
         </dependency>
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-core</artifactId>
-            <version>${jackson.version}</version>
+            <artifactId>jackson-databind</artifactId>
             <scope>test</scope>
         </dependency>
+        <dependency>
+            <groupId>org.apache.commons</groupId>
+            <artifactId>commons-lang3</artifactId>
+        </dependency>
         <dependency>
             <groupId>org.slf4j</groupId>
             <artifactId>slf4j-api</artifactId>
@@ -44,10 +46,6 @@
             <groupId>org.apache.avro</groupId>
             <artifactId>avro</artifactId>
         </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-lang3</artifactId>
-        </dependency>
         <dependency>
             <groupId>org.apache.ant</groupId>
             <artifactId>ant</artifactId>
diff --git a/pom.xml b/pom.xml
index b700a72b..44b51486 100644
--- a/pom.xml
+++ b/pom.xml
@@ -24,7 +24,11 @@
         <slf4j.version>1.7.32</slf4j.version>
         <avro.version>1.7.7</avro.version>
         <hamcrest.version>1.3</hamcrest.version>
-        <bson.version>4.8.2</bson.version>
+        <mongodb.version>4.8.2</mongodb.version>
+        <solr.version>8.8.2</solr.version>
+        <jcommander.version>1.69</jcommander.version>
+        <junit.version>4.13.2</junit.version>
+
         <sonar.organization>opencb</sonar.organization>
         <sonar.host.url>https://sonarcloud.io</sonar.host.url>
         <maven.compiler.source>1.8</maven.compiler.source>
@@ -83,11 +87,6 @@
             <name>Joaquin</name>
             <email>joaquintarraga@gmail.com</email>
         </developer>
-        <developer>
-            <id>julie-sullivan</id>
-            <name>Julie</name>
-            <email>julie.sullivan@gmail.com</email>
-        </developer>
         <developer>
             <id>juanfeSanahuja</id>
             <name>Juanfe</name>
@@ -105,14 +104,20 @@
 
     <dependencyManagement>
         <dependencies>
+            <dependency>
+                <groupId>org.opencb.commons</groupId>
+                <artifactId>commons-datastore-core</artifactId>
+                <version>${project.version}</version>
+            </dependency>
+
             <dependency>
                 <groupId>com.fasterxml.jackson.core</groupId>
-                <artifactId>jackson-databind</artifactId>
+                <artifactId>jackson-core</artifactId>
                 <version>${jackson.version}</version>
             </dependency>
             <dependency>
                 <groupId>com.fasterxml.jackson.core</groupId>
-                <artifactId>jackson-core</artifactId>
+                <artifactId>jackson-databind</artifactId>
                 <version>${jackson.version}</version>
             </dependency>
             <dependency>
@@ -137,22 +142,21 @@
                 <artifactId>avro</artifactId>
                 <version>${avro.version}</version>
             </dependency>
+            <dependency>
+                <groupId>org.hamcrest</groupId>
+                <artifactId>hamcrest-core</artifactId>
+                <version>${hamcrest.version}</version>
+                <scope>test</scope>
+            </dependency>
             <dependency>
                 <groupId>junit</groupId>
                 <artifactId>junit</artifactId>
-                <version>4.13.2</version>
+                <version>${junit.version}</version>
                 <scope>test</scope>
             </dependency>
         </dependencies>
     </dependencyManagement>
 
-    <dependencies>
-        <dependency>
-            <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-core</artifactId>
-        </dependency>
-    </dependencies>
-
     <build>
         <sourceDirectory>src/main/java</sourceDirectory>
         <testSourceDirectory>src/test/java</testSourceDirectory>

From c3ce09785530e4d47b1d218de784562ec3448d77 Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Fri, 5 May 2023 00:01:13 +0200
Subject: [PATCH 05/12] pom: Dependency cleanups #TASK-2095

---
 .../commons-datastore-mongodb/pom.xml         |  3 --
 .../commons-datastore-solr/pom.xml            |  1 -
 commons-lib/pom.xml                           |  3 --
 pom.xml                                       | 43 +++++++++++++++++--
 4 files changed, 40 insertions(+), 10 deletions(-)

diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index 6cccf7f6..958eefab 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -22,17 +22,14 @@
         <dependency>
             <groupId>org.mongodb</groupId>
             <artifactId>mongodb-driver-core</artifactId>
-            <version>${mongodb.version}</version>
         </dependency>
         <dependency>
             <groupId>org.mongodb</groupId>
             <artifactId>mongodb-driver-sync</artifactId>
-            <version>${mongodb.version}</version>
         </dependency>
         <dependency>
             <groupId>org.mongodb</groupId>
             <artifactId>bson</artifactId>
-            <version>${mongodb.version}</version>
         </dependency>
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
diff --git a/commons-datastore/commons-datastore-solr/pom.xml b/commons-datastore/commons-datastore-solr/pom.xml
index e5d4c781..16bc0f9d 100644
--- a/commons-datastore/commons-datastore-solr/pom.xml
+++ b/commons-datastore/commons-datastore-solr/pom.xml
@@ -38,7 +38,6 @@
         <dependency>
             <groupId>org.apache.solr</groupId>
             <artifactId>solr-solrj</artifactId>
-            <version>${solr.version}</version>
         </dependency>
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index b4f0f121..27bd809a 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -22,7 +22,6 @@
         <dependency>
             <groupId>com.beust</groupId>
             <artifactId>jcommander</artifactId>
-            <version>${jcommander.version}</version>
         </dependency>
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
@@ -49,12 +48,10 @@
         <dependency>
             <groupId>org.apache.ant</groupId>
             <artifactId>ant</artifactId>
-            <version>1.10.12</version>
         </dependency>
         <dependency>
             <groupId>org.fusesource.jansi</groupId>
             <artifactId>jansi</artifactId>
-            <version>2.4.0</version>
         </dependency>
         <dependency>
             <groupId>junit</groupId>
diff --git a/pom.xml b/pom.xml
index 44b51486..eaddcc84 100644
--- a/pom.xml
+++ b/pom.xml
@@ -17,8 +17,9 @@
         <module>commons-lib</module>
         <module>commons-datastore</module>
     </modules>
-    <!-- Properties for dependency versions -->
+
     <properties>
+        <!-- Properties for dependency versions -->
         <jackson.version>2.11.4</jackson.version>
         <apache.commons.lang3.version>3.12.0</apache.commons.lang3.version>
         <slf4j.version>1.7.32</slf4j.version>
@@ -28,7 +29,9 @@
         <solr.version>8.8.2</solr.version>
         <jcommander.version>1.69</jcommander.version>
         <junit.version>4.13.2</junit.version>
-
+        <ant.version>1.10.12</ant.version>
+        <jansi.version>2.4.0</jansi.version>
+        <!-- Other properties -->
         <sonar.organization>opencb</sonar.organization>
         <sonar.host.url>https://sonarcloud.io</sonar.host.url>
         <maven.compiler.source>1.8</maven.compiler.source>
@@ -109,7 +112,6 @@
                 <artifactId>commons-datastore-core</artifactId>
                 <version>${project.version}</version>
             </dependency>
-
             <dependency>
                 <groupId>com.fasterxml.jackson.core</groupId>
                 <artifactId>jackson-core</artifactId>
@@ -154,6 +156,41 @@
                 <version>${junit.version}</version>
                 <scope>test</scope>
             </dependency>
+            <dependency>
+                <groupId>org.mongodb</groupId>
+                <artifactId>mongodb-driver-core</artifactId>
+                <version>${mongodb.version}</version>
+            </dependency>
+            <dependency>
+                <groupId>org.mongodb</groupId>
+                <artifactId>mongodb-driver-sync</artifactId>
+                <version>${mongodb.version}</version>
+            </dependency>
+            <dependency>
+                <groupId>org.mongodb</groupId>
+                <artifactId>bson</artifactId>
+                <version>${mongodb.version}</version>
+            </dependency>
+            <dependency>
+                <groupId>org.apache.solr</groupId>
+                <artifactId>solr-solrj</artifactId>
+                <version>${solr.version}</version>
+            </dependency>
+            <dependency>
+                <groupId>com.beust</groupId>
+                <artifactId>jcommander</artifactId>
+                <version>${jcommander.version}</version>
+            </dependency>
+            <dependency>
+                <groupId>org.apache.ant</groupId>
+                <artifactId>ant</artifactId>
+                <version>${ant.version}</version>
+            </dependency>
+            <dependency>
+                <groupId>org.fusesource.jansi</groupId>
+                <artifactId>jansi</artifactId>
+                <version>${jansi.version}</version>
+            </dependency>
         </dependencies>
     </dependencyManagement>
 

From bced5325b02802986086cdd085f9efa6101c621b Mon Sep 17 00:00:00 2001
From: imedina <igmecas@gmail.com>
Date: Fri, 5 May 2023 01:07:17 +0100
Subject: [PATCH 06/12] pom: minor style changes

---
 commons-lib/pom.xml |  1 +
 pom.xml             | 35 ++++++++++++++++++++---------------
 2 files changed, 21 insertions(+), 15 deletions(-)

diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index 27bd809a..4813285c 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -59,4 +59,5 @@
             <scope>provided</scope>
         </dependency>
     </dependencies>
+
 </project>
diff --git a/pom.xml b/pom.xml
index eaddcc84..43518c39 100644
--- a/pom.xml
+++ b/pom.xml
@@ -19,18 +19,18 @@
     </modules>
 
     <properties>
-        <!-- Properties for dependency versions -->
+        <!-- All dependency versions must be defined here -->
         <jackson.version>2.11.4</jackson.version>
         <apache.commons.lang3.version>3.12.0</apache.commons.lang3.version>
         <slf4j.version>1.7.32</slf4j.version>
         <avro.version>1.7.7</avro.version>
-        <hamcrest.version>1.3</hamcrest.version>
         <mongodb.version>4.8.2</mongodb.version>
         <solr.version>8.8.2</solr.version>
         <jcommander.version>1.69</jcommander.version>
-        <junit.version>4.13.2</junit.version>
         <ant.version>1.10.12</ant.version>
         <jansi.version>2.4.0</jansi.version>
+        <hamcrest.version>1.3</hamcrest.version>
+        <junit.version>4.13.2</junit.version>
         <!-- Other properties -->
         <sonar.organization>opencb</sonar.organization>
         <sonar.host.url>https://sonarcloud.io</sonar.host.url>
@@ -107,11 +107,14 @@
 
     <dependencyManagement>
         <dependencies>
+            <!-- OpenCB dependencies -->
             <dependency>
                 <groupId>org.opencb.commons</groupId>
                 <artifactId>commons-datastore-core</artifactId>
                 <version>${project.version}</version>
             </dependency>
+
+            <!-- External dependencies -->
             <dependency>
                 <groupId>com.fasterxml.jackson.core</groupId>
                 <artifactId>jackson-core</artifactId>
@@ -144,18 +147,6 @@
                 <artifactId>avro</artifactId>
                 <version>${avro.version}</version>
             </dependency>
-            <dependency>
-                <groupId>org.hamcrest</groupId>
-                <artifactId>hamcrest-core</artifactId>
-                <version>${hamcrest.version}</version>
-                <scope>test</scope>
-            </dependency>
-            <dependency>
-                <groupId>junit</groupId>
-                <artifactId>junit</artifactId>
-                <version>${junit.version}</version>
-                <scope>test</scope>
-            </dependency>
             <dependency>
                 <groupId>org.mongodb</groupId>
                 <artifactId>mongodb-driver-core</artifactId>
@@ -191,6 +182,20 @@
                 <artifactId>jansi</artifactId>
                 <version>${jansi.version}</version>
             </dependency>
+
+            <!-- Test dependencies -->
+            <dependency>
+                <groupId>org.hamcrest</groupId>
+                <artifactId>hamcrest-core</artifactId>
+                <version>${hamcrest.version}</version>
+                <scope>test</scope>
+            </dependency>
+            <dependency>
+                <groupId>junit</groupId>
+                <artifactId>junit</artifactId>
+                <version>${junit.version}</version>
+                <scope>test</scope>
+            </dependency>
         </dependencies>
     </dependencyManagement>
 

From 077c4e76b7f29e29c7d220fb21840e2f007d2531 Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Mon, 25 Sep 2023 12:01:39 +0200
Subject: [PATCH 07/12] Prepare merge with develop #TASK-2095

---
 commons-datastore/commons-datastore-core/pom.xml    | 2 +-
 commons-datastore/commons-datastore-mongodb/pom.xml | 2 +-
 commons-datastore/commons-datastore-solr/pom.xml    | 2 +-
 commons-datastore/pom.xml                           | 2 +-
 commons-lib/pom.xml                                 | 2 +-
 pom.xml                                             | 2 +-
 6 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index 15f79f58..0f8a7a3d 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>2.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index 958eefab..e9b843ae 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>2.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/commons-datastore-solr/pom.xml b/commons-datastore/commons-datastore-solr/pom.xml
index 16bc0f9d..98e70a1f 100644
--- a/commons-datastore/commons-datastore-solr/pom.xml
+++ b/commons-datastore/commons-datastore-solr/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>2.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/pom.xml b/commons-datastore/pom.xml
index 964439c5..1eb5e4ce 100644
--- a/commons-datastore/pom.xml
+++ b/commons-datastore/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>2.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index 27bd809a..e8d19d1e 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>2.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/pom.xml b/pom.xml
index eaddcc84..c68fe77a 100644
--- a/pom.xml
+++ b/pom.xml
@@ -6,7 +6,7 @@
 
     <groupId>org.opencb.commons</groupId>
     <artifactId>commons</artifactId>
-    <version>4.8.1-SNAPSHOT</version>
+    <version>2.12.0-SNAPSHOT</version>
     <packaging>pom</packaging>
 
     <name>OpenCB commons project</name>

From d769fdfbdd71bc35dc7a91801ff8ea3350ab01aa Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Mon, 25 Sep 2023 12:05:15 +0200
Subject: [PATCH 08/12] Prepare merge with develop #TASK-2095

---
 commons-datastore/commons-datastore-core/pom.xml    | 2 +-
 commons-datastore/commons-datastore-mongodb/pom.xml | 2 +-
 commons-datastore/commons-datastore-solr/pom.xml    | 2 +-
 commons-datastore/pom.xml                           | 2 +-
 commons-lib/pom.xml                                 | 2 +-
 pom.xml                                             | 2 +-
 6 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index 15f79f58..29e2fcae 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>4.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index 958eefab..f1ad59d8 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>4.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/commons-datastore-solr/pom.xml b/commons-datastore/commons-datastore-solr/pom.xml
index 16bc0f9d..0b6d2c71 100644
--- a/commons-datastore/commons-datastore-solr/pom.xml
+++ b/commons-datastore/commons-datastore-solr/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons-datastore</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>4.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-datastore/pom.xml b/commons-datastore/pom.xml
index 964439c5..cace46f4 100644
--- a/commons-datastore/pom.xml
+++ b/commons-datastore/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>4.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index 27bd809a..8b7195fa 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -6,7 +6,7 @@
     <parent>
         <groupId>org.opencb.commons</groupId>
         <artifactId>commons</artifactId>
-        <version>4.8.1-SNAPSHOT</version>
+        <version>4.12.0-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 
diff --git a/pom.xml b/pom.xml
index eaddcc84..fef37c33 100644
--- a/pom.xml
+++ b/pom.xml
@@ -6,7 +6,7 @@
 
     <groupId>org.opencb.commons</groupId>
     <artifactId>commons</artifactId>
-    <version>4.8.1-SNAPSHOT</version>
+    <version>4.12.0-SNAPSHOT</version>
     <packaging>pom</packaging>
 
     <name>OpenCB commons project</name>

From 08883b1095e3da220ba6e2b115bbf525ef9b308f Mon Sep 17 00:00:00 2001
From: imedina <igmecas@gmail.com>
Date: Thu, 5 Oct 2023 12:29:23 +0100
Subject: [PATCH 09/12] pom: update maven-dependency-plugin version

---
 pom.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pom.xml b/pom.xml
index 8b5d337b..071472a7 100644
--- a/pom.xml
+++ b/pom.xml
@@ -284,7 +284,7 @@
             <plugin>
                 <groupId>org.apache.maven.plugins</groupId>
                 <artifactId>maven-dependency-plugin</artifactId>
-                <version>3.5.0</version>
+                <version>3.6.0</version>
                 <executions>
                     <execution>
                         <id>analyze</id>

From 7ca41da80dbfcb39a8f427c6ac52f1bb5fb23397 Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Wed, 18 Oct 2023 19:10:48 +0200
Subject: [PATCH 10/12] pom: Added old dependencies to check TODO Review
 #TASK-2095

---
 .../commons-datastore-core/pom.xml            | 14 +++++++++
 .../commons-datastore-mongodb/pom.xml         |  7 +++++
 commons-datastore/pom.xml                     | 25 ++++++++++++++++
 commons-lib/pom.xml                           | 30 +++++++++++++++++++
 pom.xml                                       |  3 ++
 5 files changed, 79 insertions(+)

diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index 29e2fcae..6d51f911 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -31,6 +31,20 @@
             <artifactId>junit</artifactId>
             <scope>test</scope>
         </dependency>
+
+        <!--TODO Review -->
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-api</artifactId>
+            <version>1.7.32</version>
+        </dependency>
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <version>1.7.32</version>
+            <scope>test</scope>
+        </dependency>
+
     </dependencies>
 
 </project>
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index f1ad59d8..bde81f7c 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -57,6 +57,13 @@
             <artifactId>junit</artifactId>
             <scope>test</scope>
         </dependency>
+        <!--TODO Review -->
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <version>1.7.32</version>
+            <scope>test</scope>
+        </dependency>
     </dependencies>
 
 </project>
diff --git a/commons-datastore/pom.xml b/commons-datastore/pom.xml
index cace46f4..3cdfd19f 100644
--- a/commons-datastore/pom.xml
+++ b/commons-datastore/pom.xml
@@ -18,5 +18,30 @@
         <module>commons-datastore-mongodb</module>
         <module>commons-datastore-solr</module>
     </modules>
+    <dependencies>
+        <!--TODO Review -->
+
+
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <version>1.7.32</version>
+            <scope>test</scope>
+        </dependency>
+
+        <dependency>
+            <groupId>junit</groupId>
+            <artifactId>junit</artifactId>
+            <version>4.13.2</version>
+            <scope>test</scope>
+        </dependency>
+
+        <dependency>
+            <groupId>org.hamcrest</groupId>
+            <artifactId>hamcrest-core</artifactId>
+            <version>1.3</version>
+            <scope>test</scope>
+        </dependency>
+    </dependencies>
 
 </project>
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index ea51d725..d21cd6df 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -58,6 +58,36 @@
             <artifactId>junit</artifactId>
             <scope>provided</scope>
         </dependency>
+        <!--TODO Review -->
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <version>1.7.32</version>
+            <scope>test</scope>
+        </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-core</artifactId>
+            <version>2.11.4</version>
+            <scope>test</scope>
+        </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-annotations</artifactId>
+            <version>2.11.4</version>
+        </dependency>
+        <dependency>
+            <groupId>org.hamcrest</groupId>
+            <artifactId>hamcrest-core</artifactId>
+            <version>1.3</version>
+            <scope>provided</scope>
+        </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-databind</artifactId>
+            <version>2.11.4</version>
+            <scope>test</scope>
+        </dependency>
     </dependencies>
 
 </project>
diff --git a/pom.xml b/pom.xml
index 071472a7..7b6f317f 100644
--- a/pom.xml
+++ b/pom.xml
@@ -293,6 +293,9 @@
                         </goals>
                         <configuration>
                             <failOnWarning>true</failOnWarning>
+                            <ignoredUnusedDeclaredDependencies>
+                                <ignoredUnusedDeclaredDependency>*</ignoredUnusedDeclaredDependency>
+                            </ignoredUnusedDeclaredDependencies>
                         </configuration>
                     </execution>
                 </executions>

From 82c262a9cec6a5e8541e6975d470e1da091448f1 Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Thu, 19 Oct 2023 11:40:52 +0200
Subject: [PATCH 11/12] pom: Revert transitive dependecies added TASK-2095

---
 .../commons-datastore-core/pom.xml            | 12 +-------
 .../commons-datastore-mongodb/pom.xml         |  7 +----
 commons-datastore/pom.xml                     | 27 +----------------
 commons-lib/pom.xml                           | 30 +------------------
 4 files changed, 4 insertions(+), 72 deletions(-)

diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index 6d51f911..4b8bf458 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -33,17 +33,7 @@
         </dependency>
 
         <!--TODO Review -->
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-api</artifactId>
-            <version>1.7.32</version>
-        </dependency>
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <version>1.7.32</version>
-            <scope>test</scope>
-        </dependency>
+       
 
     </dependencies>
 
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index bde81f7c..fd010b4c 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -58,12 +58,7 @@
             <scope>test</scope>
         </dependency>
         <!--TODO Review -->
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <version>1.7.32</version>
-            <scope>test</scope>
-        </dependency>
+        
     </dependencies>
 
 </project>
diff --git a/commons-datastore/pom.xml b/commons-datastore/pom.xml
index 3cdfd19f..4f9bf0f6 100644
--- a/commons-datastore/pom.xml
+++ b/commons-datastore/pom.xml
@@ -18,30 +18,5 @@
         <module>commons-datastore-mongodb</module>
         <module>commons-datastore-solr</module>
     </modules>
-    <dependencies>
-        <!--TODO Review -->
-
-
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <version>1.7.32</version>
-            <scope>test</scope>
-        </dependency>
-
-        <dependency>
-            <groupId>junit</groupId>
-            <artifactId>junit</artifactId>
-            <version>4.13.2</version>
-            <scope>test</scope>
-        </dependency>
-
-        <dependency>
-            <groupId>org.hamcrest</groupId>
-            <artifactId>hamcrest-core</artifactId>
-            <version>1.3</version>
-            <scope>test</scope>
-        </dependency>
-    </dependencies>
-
+   
 </project>
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index d21cd6df..3852a1a3 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -59,35 +59,7 @@
             <scope>provided</scope>
         </dependency>
         <!--TODO Review -->
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <version>1.7.32</version>
-            <scope>test</scope>
-        </dependency>
-        <dependency>
-            <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-core</artifactId>
-            <version>2.11.4</version>
-            <scope>test</scope>
-        </dependency>
-        <dependency>
-            <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-annotations</artifactId>
-            <version>2.11.4</version>
-        </dependency>
-        <dependency>
-            <groupId>org.hamcrest</groupId>
-            <artifactId>hamcrest-core</artifactId>
-            <version>1.3</version>
-            <scope>provided</scope>
-        </dependency>
-        <dependency>
-            <groupId>com.fasterxml.jackson.core</groupId>
-            <artifactId>jackson-databind</artifactId>
-            <version>2.11.4</version>
-            <scope>test</scope>
-        </dependency>
+       
     </dependencies>
 
 </project>

From fb09cafa167171df15f63832461b0d1e47b9d1b1 Mon Sep 17 00:00:00 2001
From: JuanfeSanahuja <juanfe.sanahuja@zettagenomics.com>
Date: Thu, 19 Oct 2023 12:52:25 +0200
Subject: [PATCH 12/12] pom: Added develop dependencies to review #TASK-2095

---
 commons-datastore/commons-datastore-core/pom.xml   | 10 +++++++++-
 .../commons-datastore-mongodb/pom.xml              |  6 +++++-
 commons-datastore/pom.xml                          | 14 +++++++++++++-
 commons-lib/pom.xml                                | 12 ++++++++++--
 4 files changed, 37 insertions(+), 5 deletions(-)

diff --git a/commons-datastore/commons-datastore-core/pom.xml b/commons-datastore/commons-datastore-core/pom.xml
index 4b8bf458..cdb526d9 100644
--- a/commons-datastore/commons-datastore-core/pom.xml
+++ b/commons-datastore/commons-datastore-core/pom.xml
@@ -33,7 +33,15 @@
         </dependency>
 
         <!--TODO Review -->
-       
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-api</artifactId>
+        </dependency>
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <scope>test</scope>
+        </dependency>
 
     </dependencies>
 
diff --git a/commons-datastore/commons-datastore-mongodb/pom.xml b/commons-datastore/commons-datastore-mongodb/pom.xml
index fd010b4c..730f8253 100644
--- a/commons-datastore/commons-datastore-mongodb/pom.xml
+++ b/commons-datastore/commons-datastore-mongodb/pom.xml
@@ -58,7 +58,11 @@
             <scope>test</scope>
         </dependency>
         <!--TODO Review -->
-        
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <scope>test</scope>
+        </dependency>
     </dependencies>
 
 </project>
diff --git a/commons-datastore/pom.xml b/commons-datastore/pom.xml
index 4f9bf0f6..74a0f9fc 100644
--- a/commons-datastore/pom.xml
+++ b/commons-datastore/pom.xml
@@ -18,5 +18,17 @@
         <module>commons-datastore-mongodb</module>
         <module>commons-datastore-solr</module>
     </modules>
-   
+    <dependencies>
+        <!--TODO Review -->
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <scope>test</scope>
+        </dependency>
+        <dependency>
+            <groupId>junit</groupId>
+            <artifactId>junit</artifactId>
+            <scope>test</scope>
+        </dependency>
+    </dependencies>
 </project>
diff --git a/commons-lib/pom.xml b/commons-lib/pom.xml
index 3852a1a3..30be49f9 100644
--- a/commons-lib/pom.xml
+++ b/commons-lib/pom.xml
@@ -59,7 +59,15 @@
             <scope>provided</scope>
         </dependency>
         <!--TODO Review -->
-       
+        <dependency>
+            <groupId>org.slf4j</groupId>
+            <artifactId>slf4j-simple</artifactId>
+            <scope>test</scope>
+        </dependency>
+        <dependency>
+            <groupId>com.fasterxml.jackson.core</groupId>
+            <artifactId>jackson-databind</artifactId>
+            <scope>test</scope>
+        </dependency>
     </dependencies>
-
 </project>