chore: Upgrade Python requirements

requirements/base.txt

@@ -1,5 +1,5 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.11
 # by the following command:
 #
 #    pip-compile --output-file=requirements/base.txt requirements/base.in
@@ -8,19 +8,19 @@ click==8.1.7
     # via nltk
 joblib==1.4.2
     # via nltk
-markupsafe==2.1.5
+markupsafe==3.0.2
     # via -r requirements/base.in
-nltk==3.8.1
+nltk==3.9.1
     # via -r requirements/base.in
-numpy==1.24.4
+numpy==2.1.3
     # via
     #   -r requirements/base.in
     #   scipy
-pyparsing==3.1.2
+pyparsing==3.2.0
     # via -r requirements/base.in
-regex==2024.5.15
+regex==2024.11.6
     # via nltk
-scipy==1.10.1
+scipy==1.14.1
     # via -r requirements/base.in
-tqdm==4.66.4
+tqdm==4.67.1
     # via nltk

requirements/ci.txt

@@ -1,86 +1,81 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.11
 # by the following command:
 #
 #    pip-compile --output-file=requirements/ci.txt requirements/ci.in
 #
-cachetools==5.3.3
+cachetools==5.5.0
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox
 chardet==5.2.0
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox
 click==8.1.7
     # via
-    #   -r requirements/test.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
     #   nltk
 colorama==0.4.6
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox
-coverage==7.5.4
-    # via -r requirements/test.txt
-distlib==0.3.8
+coverage==7.6.8
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
+distlib==0.3.9
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   virtualenv
-filelock==3.15.4
+filelock==3.16.1
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox
     #   virtualenv
 joblib==1.4.2
     # via
-    #   -r requirements/test.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
     #   nltk
-markupsafe==2.1.5
-    # via -r requirements/test.txt
-nltk==3.8.1
-    # via -r requirements/test.txt
-numpy==1.24.4
+markupsafe==3.0.2
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
+nltk==3.9.1
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
+numpy==2.1.3
     # via
-    #   -r requirements/test.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
     #   scipy
-packaging==24.1
+packaging==24.2
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   pyproject-api
     #   tox
-platformdirs==4.2.2
+platformdirs==4.3.6
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox
     #   virtualenv
 pluggy==1.5.0
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox
-pyparsing==3.1.2
-    # via -r requirements/test.txt
-pyproject-api==1.7.1
+pyparsing==3.2.0
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
+pyproject-api==1.8.0
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox
-regex==2024.5.15
+regex==2024.11.6
     # via
-    #   -r requirements/test.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
     #   nltk
-scipy==1.10.1
-    # via -r requirements/test.txt
-tomli==2.0.1
+scipy==1.14.1
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
+tox==4.23.2
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
+tqdm==4.67.1
     # via
-    #   -r requirements/tox.txt
-    #   pyproject-api
-    #   tox
-tox==4.15.1
-    # via -r requirements/tox.txt
-tqdm==4.66.4
-    # via
-    #   -r requirements/test.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/test.txt
     #   nltk
-virtualenv==20.26.3
+virtualenv==20.28.0
     # via
-    #   -r requirements/tox.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/tox.txt
     #   tox

requirements/pip.txt

@@ -1,10 +1,10 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.11
 # by the following command:
 #
 #    pip-compile --output-file=requirements/pip.txt requirements/pip.in
 #
-wheel==0.43.0
+wheel==0.45.1
     # via -r requirements/pip.in
 
 # The following packages are considered to be unsafe in a requirements file:

requirements/pip_tools.txt

@@ -1,33 +1,23 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.11
 # by the following command:
 #
 #    pip-compile --output-file=requirements/pip_tools.txt requirements/pip_tools.in
 #
-build==1.2.1
+build==1.2.2.post1
     # via pip-tools
 click==8.1.7
     # via pip-tools
-importlib-metadata==6.11.0
-    # via
-    #   -c https://raw.githubusercontent.com/edx/edx-lint/master/edx_lint/files/common_constraints.txt
-    #   build
-packaging==24.1
+packaging==24.2
     # via build
 pip-tools==7.4.1
     # via -r requirements/pip_tools.in
-pyproject-hooks==1.1.0
-    # via
-    #   build
-    #   pip-tools
-tomli==2.0.1
+pyproject-hooks==1.2.0
     # via
     #   build
     #   pip-tools
-wheel==0.43.0
+wheel==0.45.1
     # via pip-tools
-zipp==3.19.2
-    # via importlib-metadata
 
 # The following packages are considered to be unsafe in a requirements file:
 # pip

requirements/quality.txt

@@ -1,56 +1,50 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.11
 # by the following command:
 #
 #    pip-compile --output-file=requirements/quality.txt requirements/quality.in
 #
-astroid==3.2.2
+astroid==3.3.5
     # via pylint
 click==8.1.7
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk
-dill==0.3.8
+dill==0.3.9
     # via pylint
 isort==5.13.2
     # via pylint
 joblib==1.4.2
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk
-markupsafe==2.1.5
-    # via -r requirements/base.txt
+markupsafe==3.0.2
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
 mccabe==0.7.0
     # via pylint
-nltk==3.8.1
-    # via -r requirements/base.txt
-numpy==1.24.4
+nltk==3.9.1
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
+numpy==2.1.3
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   scipy
-platformdirs==4.2.2
+platformdirs==4.3.6
     # via pylint
-pycodestyle==2.12.0
+pycodestyle==2.12.1
     # via -r requirements/quality.in
-pylint==3.2.3
+pylint==3.3.2
     # via -r requirements/quality.in
-pyparsing==3.1.2
-    # via -r requirements/base.txt
-regex==2024.5.15
+pyparsing==3.2.0
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
+regex==2024.11.6
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk
-scipy==1.10.1
-    # via -r requirements/base.txt
-tomli==2.0.1
+scipy==1.14.1
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
+tomlkit==0.13.2
     # via pylint
-tomlkit==0.12.5
-    # via pylint
-tqdm==4.66.4
+tqdm==4.67.1
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk
-typing-extensions==4.12.2
-    # via
-    #   astroid
-    #   pylint

requirements/test.txt

@@ -1,36 +1,36 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.11
 # by the following command:
 #
 #    pip-compile --output-file=requirements/test.txt requirements/test.in
 #
 click==8.1.7
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk
-coverage==7.5.4
+coverage==7.6.8
     # via -r requirements/test.in
 joblib==1.4.2
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk
-markupsafe==2.1.5
-    # via -r requirements/base.txt
-nltk==3.8.1
-    # via -r requirements/base.txt
-numpy==1.24.4
+markupsafe==3.0.2
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
+nltk==3.9.1
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
+numpy==2.1.3
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   scipy
-pyparsing==3.1.2
-    # via -r requirements/base.txt
-regex==2024.5.15
+pyparsing==3.2.0
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
+regex==2024.11.6
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk
-scipy==1.10.1
-    # via -r requirements/base.txt
-tqdm==4.66.4
+scipy==1.14.1
+    # via -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
+tqdm==4.67.1
     # via
-    #   -r requirements/base.txt
+    #   -r /home/runner/work/openedx-chem/openedx-chem/requirements/base.txt
     #   nltk

requirements/tox.txt

@@ -1,38 +1,34 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.11
 # by the following command:
 #
 #    pip-compile --output-file=requirements/tox.txt requirements/tox.in
 #
-cachetools==5.3.3
+cachetools==5.5.0
     # via tox
 chardet==5.2.0
     # via tox
 colorama==0.4.6
     # via tox
-distlib==0.3.8
+distlib==0.3.9
     # via virtualenv
-filelock==3.15.4
+filelock==3.16.1
     # via
     #   tox
     #   virtualenv
-packaging==24.1
+packaging==24.2
     # via
     #   pyproject-api
     #   tox
-platformdirs==4.2.2
+platformdirs==4.3.6
     # via
     #   tox
     #   virtualenv
 pluggy==1.5.0
     # via tox
-pyproject-api==1.7.1
+pyproject-api==1.8.0
     # via tox
-tomli==2.0.1
-    # via
-    #   pyproject-api
-    #   tox
-tox==4.15.1
+tox==4.23.2
     # via -r requirements/tox.in
-virtualenv==20.26.3
+virtualenv==20.28.0
     # via tox