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[PRE REVIEW]: cdsaxs: A model fitting package for CD-SAXS data analysis #7269

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editorialbot opened this issue Sep 23, 2024 · 32 comments
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pre-review Track: 2 (BCM) Biomedical Engineering, Biosciences, Chemistry, and Materials

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editorialbot commented Sep 23, 2024

Submitting author: @mrhxszo (nischal dhungana)
Repository: https://github.com/CEA-MetroCarac/cdsaxs
Branch with paper.md (empty if default branch): paper
Version: v0.0.2
Editor: @srmnitc
Reviewers: @benjaminbolling, @marcocamma
Managing EiC: Kevin M. Moerman

Status

status

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HTML: <a href="https://joss.theoj.org/papers/ed3d2c3d186d1407b25b6096e3c0ee57"><img src="https://joss.theoj.org/papers/ed3d2c3d186d1407b25b6096e3c0ee57/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/ed3d2c3d186d1407b25b6096e3c0ee57/status.svg)](https://joss.theoj.org/papers/ed3d2c3d186d1407b25b6096e3c0ee57)

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Thanks for submitting your paper to JOSS @mrhxszo. Currently, there isn't a JOSS editor assigned to your paper.

@mrhxszo if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

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@editorialbot editorialbot added pre-review Track: 2 (BCM) Biomedical Engineering, Biosciences, Chemistry, and Materials labels Sep 23, 2024
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Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

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For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.1107/S1600576715013369 is OK
- 10.1117/1.JMM.15.1.014001 is OK
- 10.1117/1.JMM.15.3.034001 is OK

🟡 SKIP DOIs

- None

❌ MISSING DOIs

- None

❌ INVALID DOIs

- None

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Software report:

github.com/AlDanial/cloc v 1.90  T=0.03 s (1118.9 files/s, 179505.5 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
Python                          13            506            557           1267
Jupyter Notebook                 5              0           1465            405
reStructuredText                 7            221            129            214
Markdown                         2             77              0            138
YAML                             2              7              4            119
TOML                             1             11              0             86
TeX                              1              3              0             30
DOS Batch                        1              8              1             26
make                             1              4              7              9
-------------------------------------------------------------------------------
SUM:                            33            837           2163           2294
-------------------------------------------------------------------------------

Commit count by author:

    82	Nischal Dhungana
    29	Matthew Bryan
    16	Nischal
    14	Nischal DHUNGANA ND276333
     5	DHUNGANA Nischal
     4	gfreychet
     1	patquem
     1	timothee_choisnet

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Paper file info:

📄 Wordcount for paper.md is 926

✅ The paper includes a Statement of need section

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License info:

✅ License found: MIT License (Valid open source OSI approved license)

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👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

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Five most similar historical JOSS papers:

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⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

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@editorialbot check references

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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.1107/S1600576715013369 is OK
- 10.1117/1.JMM.15.1.014001 is OK
- 10.1117/1.JMM.15.3.034001 is OK

🟡 SKIP DOIs

- None

❌ MISSING DOIs

- None

❌ INVALID DOIs

- None

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Kevin-Mattheus-Moerman commented Sep 23, 2024

@mrhxszo Dear author, thanks for this submission. I am the AEiC on this track and here to help process the initial steps. Before we proceed, please can you have a look at the following points:

  • Your project appears to lack contributing guidelines at the moment. Please work to add these and to mention/link to them in your README. You could for instance create a CONTRIBUTING.md file (see here for some examples: https://contributing.md/example/).

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@editorialbot invite @srmnitc as editor

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Invitation to edit this submission sent!

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mrhxszo commented Sep 26, 2024

@Kevin-Mattheus-Moerman Thank you for your help. I've added CONTRIBUTING.md and linked it on my README.md. Please let me know if you see further room for improvements.

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@srmnitc 👋

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srmnitc commented Sep 30, 2024

@Kevin-Mattheus-Moerman sorry for the delay, I was travelling last week and unfortunately did not follow up with all the notifications. Looks interesting, I will take this up.

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srmnitc commented Sep 30, 2024

@editorialbot assign me as editor

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Assigned! @srmnitc is now the editor

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srmnitc commented Oct 9, 2024

@mrhxszo I will be the handling editor for this submission. The next step would be to find some reviewers for the submission. Do you have any suggestions for potentials reviewers?

Meanwhile, feel free to ask me any questions here.

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srmnitc commented Oct 18, 2024

@ZhenchenHong @benjaminbolling @larsenkg @trygvrad, would any of you have time and be willing to review this submission for JOSS? As you might know, we carry out our checklist-driven reviews here in GitHub issues and follow these guidelines. Thanks for your time!

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Hi there! I see not much has happened, sorry for the late reply. This is an interesting application. You can add me as a reviewer.

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srmnitc commented Nov 14, 2024

Thanks a lot @benjaminbolling. I was not available unfortunately, so you are not late at all :)

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srmnitc commented Nov 14, 2024

@editorialbot add @benjaminbolling as reviewer

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@benjaminbolling added to the reviewers list!

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srmnitc commented Nov 14, 2024

@marcocamma @bmansel would any of you have time and be willing to review this submission for JOSS? As you might know, we carry out our checklist-driven reviews here in GitHub issues and follow these guidelines. Thanks for your time!

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srmnitc commented Nov 28, 2024

@jwuttke @stuartcampbell would any of you have time and be willing to review this submission for JOSS? As you might know, we carry out our checklist-driven reviews here in GitHub issues and follow these guidelines. Thanks for your time!

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Sorry I was busy for a few weeks. Is help still needed ?

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srmnitc commented Dec 2, 2024

Sorry I was busy for a few weeks. Is help still needed ?

That would be very helpful, thank you! Shall I add you as a reviewer?

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@srmnitc , yes please

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srmnitc commented Dec 3, 2024

@editorialbot add @marcocamma as reviewer

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@marcocamma added to the reviewers list!

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srmnitc commented Dec 3, 2024

@editorialbot start review

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OK, I've started the review over in #7559.

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