From 3df45e1dc3128e572686c5f6cdd1c853c9664819 Mon Sep 17 00:00:00 2001 From: Katerina Gkirtzou Date: Thu, 1 Feb 2018 13:53:54 +0200 Subject: [PATCH] Fixed error in visualization in firefox --- .../documentation/index-en.html | 41 +++++++++---- .../CollapsibleTreeVisualization/d3.v3.min.js | 5 ++ .../CollapsibleTreeVisualization/dndTree.js | 60 +++++++++---------- .../documentation/sections/dndTree.html | 3 - 4 files changed, 62 insertions(+), 47 deletions(-) create mode 100644 OnToology/omtd-share-ontology.owl/documentation/resources/CollapsibleTreeVisualization/d3.v3.min.js delete mode 100644 OnToology/omtd-share-ontology.owl/documentation/sections/dndTree.html diff --git a/OnToology/omtd-share-ontology.owl/documentation/index-en.html b/OnToology/omtd-share-ontology.owl/documentation/index-en.html index 9e17e34..e90d8b0 100644 --- a/OnToology/omtd-share-ontology.owl/documentation/index-en.html +++ b/OnToology/omtd-share-ontology.owl/documentation/index-en.html @@ -18,20 +18,22 @@ - + - + + + + + @@ -88,8 +92,21 @@

OMTD-SHARE ontology

+ + +
+

OMTD-SHARE ontology: Hierachical Visualization back to ToC

+ This section provides an interactive visualization of the class hierachy defined by OMTD-SHARE ontology. + The figure offers the following functionalities : + +
+
-
@@ -98,5 +115,7 @@

Acknowledgements back to The authors would like to thank Silvio Peroni for developing LODE, a Live OWL Documentation Environment, which is used for representing the Cross Referencing Section of this document and Daniel Garijo for developing Widoco, the program used to create the template used in this documentation.

+ + diff --git a/OnToology/omtd-share-ontology.owl/documentation/resources/CollapsibleTreeVisualization/d3.v3.min.js b/OnToology/omtd-share-ontology.owl/documentation/resources/CollapsibleTreeVisualization/d3.v3.min.js new file mode 100644 index 0000000..1664873 --- /dev/null +++ b/OnToology/omtd-share-ontology.owl/documentation/resources/CollapsibleTreeVisualization/d3.v3.min.js @@ -0,0 +1,5 @@ +!function(){function n(n){return n&&(n.ownerDocument||n.document||n).documentElement}function t(n){return n&&(n.ownerDocument&&n.ownerDocument.defaultView||n.document&&n||n.defaultView)}function e(n,t){return t>n?-1:n>t?1:n>=t?0:NaN}function r(n){return null===n?NaN:+n}function i(n){return!isNaN(n)}function u(n){return{left:function(t,e,r,i){for(arguments.length<3&&(r=0),arguments.length<4&&(i=t.length);i>r;){var u=r+i>>>1;n(t[u],e)<0?r=u+1:i=u}return r},right:function(t,e,r,i){for(arguments.length<3&&(r=0),arguments.length<4&&(i=t.length);i>r;){var u=r+i>>>1;n(t[u],e)>0?i=u:r=u+1}return 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b/OnToology/omtd-share-ontology.owl/documentation/resources/CollapsibleTreeVisualization/dndTree.js index 302ea00..06e8f6f 100644 --- a/OnToology/omtd-share-ontology.owl/documentation/resources/CollapsibleTreeVisualization/dndTree.js +++ b/OnToology/omtd-share-ontology.owl/documentation/resources/CollapsibleTreeVisualization/dndTree.js @@ -28,11 +28,10 @@ EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.*/ - // Get JSON data // flare.json example file treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontology-visualization.json", function(error, treeData) { - + //"use strict"; // Calculate total nodes, max label length var totalNodes = 0; @@ -49,12 +48,12 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo var root; // size of the diagram - var margin = {top: 20, right: 120, bottom: 20, left: 120}; - var viewerWidth = $(document).width()- margin.right - margin.left; - var viewerHeight = 1000;//$(document).height(); + var margin = {top: 20, right: 150, bottom: 20, left: 150}; + var treeSvgWidth = $(document).width() - margin.right; + var treeSvgHeight = 600;//$(document).height(); var tree = d3.layout.tree() - .size([viewerHeight, viewerWidth]); + .size([treeSvgHeight, treeSvgWidth]); // define a d3 diagonal projection for use by the node paths later on. @@ -98,7 +97,6 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo sortTree(); // TODO: Pan function, can be better implemented. - function pan(domNode, direction) { var speed = panSpeed; if (panTimer) { @@ -179,26 +177,25 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo // Define the tooltip to be displayed - var tip = d3.tip() + var mytooltip = d3.tip() .attr('class', 'd3-tip') .offset([-10, 0]) .direction('e') .html(function(d) { - tooltipText = "Label: " + d.name - tooltipText = tooltipText + "
IRI: " + d.URI - tooltipText = tooltipText + "
Definition: " + d.definition - return tooltipText + var tooltipText = "Label: " + d.name; + tooltipText = tooltipText + "
IRI: " + d.URI; + tooltipText = tooltipText + "
Definition: " + d.definition; + return tooltipText; }) - + // define the baseSvg, attaching a class for styling and the zoomListener - var baseSvg = d3.select("#tree-container").append("svg") - .attr("width", viewerWidth) - .attr("height", viewerHeight) + var baseSvg = d3.select("#tree-container").append("svg") + .attr("width", treeSvgWidth + "px") + .attr("height", treeSvgHeight + "px") .attr("class", "overlay") .call(zoomListener) - .call(tip); - - // console.log('BaseSVG', baseSvg) + .call(mytooltip); + /* // Define the drag listeners for drag/drop behaviour of nodes. @@ -350,11 +347,11 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo // Function to center node when clicked/dropped so node doesn't get // lost when collapsing/moving with large amount of children. function centerNode(source) { - scale = zoomListener.scale(); - x = -source.y0; - y = -source.x0; - x = x * scale + viewerWidth / 2; - y = y * scale + viewerHeight / 2; + var scale = zoomListener.scale(); + var x = -source.y0; + var y = -source.x0; + x = x * scale + treeSvgWidth / 2; + y = y * scale + treeSvgHeight / 2; d3.select('g').transition() .duration(duration) .attr("transform", "translate(" + x + "," + y + ")scale(" + scale + ")"); @@ -400,7 +397,7 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo }; childCount(0, root); var newHeight = d3.max(levelWidth) * 25; // 25 pixels per line - tree = tree.size([newHeight, viewerWidth]); + tree = tree.size([newHeight, treeSvgWidth]); // Compute the new tree layout. var nodes = tree.nodes(root).reverse(), @@ -415,7 +412,7 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo }); // Update the nodes… - node = svgGroup.selectAll("g.node") + var node = svgGroup.selectAll("g.node") .data(nodes, function(d) { return d.id || (d.id = ++i); }); @@ -429,8 +426,8 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo return "translate(" + source.y0 + "," + source.x0 + ")"; }) .on('click', click) - .on('mouseover', tip.show) - .on('mouseout', tip.hide); + .on('mouseover', mytooltip.show) + .on('mouseout', mytooltip.hide); nodeEnter.append("circle") .attr('class', 'nodeCircle') @@ -561,16 +558,13 @@ treeJSON = d3.json("resources/CollapsibleTreeVisualization/omtd-share-tdm-ontolo // Append a group which holds all nodes and which the zoom Listener can act upon. var svgGroup = baseSvg.append("g"); - //console.log('Base svg ', baseSvg); // Define the root root = treeData; - - root.x0 = viewerHeight / 2; + root.x0 = treeSvgHeight / 2; root.y0 = 0; // Layout the tree initially and center on the root node. update(root); centerNode(root); - // console.log('Root', root); - // console.log('Base svg ', baseSvg); }); + diff --git a/OnToology/omtd-share-ontology.owl/documentation/sections/dndTree.html b/OnToology/omtd-share-ontology.owl/documentation/sections/dndTree.html deleted file mode 100644 index 3c559ee..0000000 --- a/OnToology/omtd-share-ontology.owl/documentation/sections/dndTree.html +++ /dev/null @@ -1,3 +0,0 @@ -

OMTD-SHARE ontology: Hierachical Visualization back to ToC

-
-