Repositories list

• BpodProtocols_Olf2AFC

  Public
  Olfactory discrimination 2AFC task.

  MATLAB

  •6•0•2•0•Updated Feb 22, 2024Feb 22, 2024

• Detection2AFC_RDK_USV_Conf

  Public
  MATLAB

  •0•0•0•0•Updated Feb 13, 2024Feb 13, 2024

• Dual2AFC_RDK_USV_STCONF

  Public
  MATLAB

  •0•0•0•0•Updated Feb 13, 2024Feb 13, 2024

• NosePoke_Invest

  Public
  bare bones time estimation task

  MATLAB

  •0•0•0•0•Updated Feb 10, 2024Feb 10, 2024

• neuropixels_preprocessing

  Public
  Preprocessing pipeline for Neuropixels recordings using kilosort, additional cluster metrics, Phy2, and export functions to cellbase

  MATLAB

  •4•1•0•0•Updated Aug 9, 2022Aug 9, 2022

• Switch_Dual2AFC

  Public
  Based on 2AFC with 4th port for self-paced block switches

  MATLAB

  •0•0•0•0•Updated Jan 26, 2022Jan 26, 2022

• CellBase

  Public
  Matlab-based data base and analysis functions for neural recordings.

  MATLAB

  •7•0•5•1•Updated Dec 22, 2021Dec 22, 2021

• BpodFunctions

  Public
  Useful Bpod Functions.

  MATLAB

  •2•0•0•0•Updated Dec 22, 2021Dec 22, 2021

• TaskMatching

  Public
  Submodule for Bpod protocol MATCHING, a 2AFC in which information about which choice will be rewarded is provided probabilistically by trial history.

  MATLAB

  •2•1•0•0•Updated Dec 13, 2021Dec 13, 2021

• Bpod

  Public
  Open source rodent behavior measurement and control

  MATLAB

  •

  GNU General Public License v3.0

  •18•2•4•4•Updated Dec 10, 2021Dec 10, 2021

• SwitchNosePoke

  Public
  Nosepoke foraging task with a 4th port that "resets" the patch contingencies

  MATLAB

  •0•0•0•0•Updated Oct 26, 2021Oct 26, 2021

• SunkCostModel

  Public
  Apparent sunk cost effect in rational agents

  1•2•0•0•Updated Oct 22, 2021Oct 22, 2021

• BpodProtocols_NosePoke

  Public
  MATLAB

  •5•0•0•0•Updated Jun 7, 2021Jun 7, 2021

• Mclust

  Public
  David Redish's MClust, forked from v3.5 and adapted by Hyun Jae Pi to work with data output by SpikeGadgets

  MATLAB

  •1•2•0•0•Updated Apr 19, 2021Apr 19, 2021

• tasksuite_analysis

  Public
  Analysis code for data generated by behavioral tasks of TaskSuite

  Python

  •1•0•0•0•Updated Mar 20, 2020Mar 20, 2020

• tasksuite_nb

  Public
  Notebooks analyzing TaskSuite behavioral data

  Jupyter Notebook

  •2•1•0•0•Updated Feb 21, 2020Feb 21, 2020

• EllipticalClustering

  Public
  MATLAB

  •1•0•0•0•Updated Jul 26, 2019Jul 26, 2019

• CuedOutcome_Sensors

  Public
  Sensors project Bpod behavior and plotting

  MATLAB

  •0•0•0•0•Updated Feb 6, 2019Feb 6, 2019

• MClust_4_4

  Public
  Modifications to David Redish's MClust4.4 to accomodate 32ch NNx probes acquired with SpikeGadgets

  MATLAB

  •2•0•0•0•Updated Feb 5, 2019Feb 5, 2019

• Sensors-behav-test

  Public
  metric for CuedOutcome behavior performace. developed by SSt

  MATLAB

  •0•0•0•0•Updated Sep 20, 2018Sep 20, 2018

• mountainsort_matlab_wrapper

  Public
  MATLAB

  •0•0•0•0•Updated Aug 21, 2018Aug 21, 2018

• mountainsort_metrics_package

  Public
  MATLAB

  •0•0•1•0•Updated Aug 21, 2018Aug 21, 2018

• Bpod_r0_5

  Public
  Open source behavior measurement and control

  Eagle

  •9•1•4•0•Updated Apr 18, 2018Apr 18, 2018

• gitTutorial

  Public
  TeX

  •0•0•0•0•Updated Jul 20, 2016Jul 20, 2016

• GUI

  Public
  Software for electrophysiology data acquisition

  C++

  •

  GNU General Public License v3.0

  •282•1•0•0•Updated Aug 31, 2013Aug 31, 2013

• ChoiceBallSystem

  Public
  C++

  •0•3•0•0•Updated Nov 19, 2012Nov 19, 2012