Eternagame

All

31 repositories

OpenKnotScoreMATLAB
Public
scripts and examples for scoring pseudoknot designs based on chemical mapping data
MATLAB
•
MIT License
•1•3•0•2•Updated Nov 22, 2024Nov 22, 2024
eternagame.org
Public
Website for the Eterna citizen science game
game website vuejs rna citizen-science hacktoberfest serious-game serious-games citsci citscigames
Vue
•
BSD 3-Clause "New" or "Revised" License
•17•19•50•3•Updated Nov 22, 2024Nov 22, 2024
OpenKnotScorePipeline
Public
Python pipeline to generate OpenKnotScores for Eterna sequence libraries
Jupyter Notebook
•
MIT License
•0•1•0•0•Updated Nov 19, 2024Nov 19, 2024
eterna-mobile
Public
Eterna mobile app
android ios mobile vue mobile-app rna hacktoberfest citsci citscigames
Vue
•
BSD 3-Clause "New" or "Revised" License
•0•3•15•1•Updated Nov 18, 2024Nov 18, 2024
EternaJS
Public
Eterna game/RNA design interface
game rna citizen-science hacktoberfest serious-game rna-design serious-games citsci citscigames
TypeScript
•
Other
•10•12•135•4•Updated Nov 14, 2024Nov 14, 2024
eterna100-benchmarking
Public
Eterna100-V2 benchmarking results and scripts
Makefile
•0•10•2•0•Updated Oct 15, 2024Oct 15, 2024
conc_plots
Public archive
Python
•
MIT License
•0•0•0•0•Updated Sep 13, 2024Sep 13, 2024
KaggleOpenVaccine
Public
Jupyter Notebook
•
MIT License
•7•0•0•0•Updated Sep 11, 2024Sep 11, 2024
eterna-chat-wrapper
Public
Temporary wrapper for Eterna's legacy IRC chat client to support easy installation and multiple channels
TypeScript
•1•0•0•2•Updated Aug 30, 2024Aug 30, 2024
HTML-Chat
Public
HTML5 implementation of chat to replace the legacy Flash-based implementation
javascript irc irc-client html
JavaScript
•
BSD 3-Clause "New" or "Revised" License
•5•7•40•3•Updated Aug 30, 2024Aug 30, 2024
EternaFold
Public
Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
C++
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Other
•10•49•3•1•Updated Jul 17, 2024Jul 17, 2024
development-bootcamp-2020
Public archive
JavaScript
•2•6•0•2•Updated Jul 2, 2024Jul 2, 2024
EternaBrain
Public
Deep learning to solve RNA design puzzles
bioinformatics neural-networks rna secondary-structure rna-design deep-learning convolutional-neural-networks
Python
•
Other
•11•19•7•1•Updated Apr 7, 2024Apr 7, 2024
paper-data-rationally-designed-RNA-sensor
Public
Figures for paper "Rationally designed RNA sensors that compute increasingly complex functions of multiple inputs""
0•0•0•0•Updated Jan 9, 2024Jan 9, 2024
EternaDataRibonet
Public
curated datasets from the Eterna project used to train and test Ribonet
0•0•0•0•Updated Dec 18, 2023Dec 18, 2023
workspace-helpers
Public
Helper packages for JS projects
hacktoberfest
TypeScript
•
BSD 3-Clause "New" or "Revised" License
•0•4•28•4•Updated Oct 24, 2023Oct 24, 2023
eterna-next
Public
The Eterna citizen science platform for RNA design
game website rna citizen-science
TypeScript
•
Other
•0•0•265•4•Updated Oct 24, 2023Oct 24, 2023
.github
Public
BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Dec 16, 2022Dec 16, 2022
nemo
Public
NEsted iterated MOntecarlo rna inverse folding
C++
•
MIT License
•0•0•0•0•Updated Dec 4, 2022Dec 4, 2022
DegScore
Public archive
Arnie-based DegScore tool.
Jupyter Notebook
•
MIT License
•6•23•0•0•Updated Sep 30, 2022Sep 30, 2022
EternaBench
Public archive
Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.
database rna-structure ensemble
Jupyter Notebook
•
MIT License
•3•16•0•0•Updated Jun 10, 2022Jun 10, 2022
ngl
Public
WebGL protein viewer
TypeScript
•
MIT License
•170•0•0•0•Updated Jan 26, 2022Jan 26, 2022
superfolder-covid-mrna-vaccines
Public archive
SuperFolder COVID mRNA vaccines, stabilized for in vitro storage and shipping
Jupyter Notebook
•
Other
•21•90•1•0•Updated Jan 14, 2022Jan 14, 2022
pixi-multistyle-text
Public
Multi-Style Text for pixi.js
TypeScript
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MIT License
•39•0•0•0•Updated May 29, 2021May 29, 2021
design
Public
A repository of design source files for eternagame.org
CSS
•0•1•0•0•Updated Dec 9, 2020Dec 9, 2020
EternaScore
Public archive
Scripts used for scoring Eterna designs over the years
MATLAB
•
BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Jul 23, 2020Jul 23, 2020
data-browser
Public
HTML5 databrowser (omei/t47)
JavaScript
•
BSD 3-Clause "New" or "Revised" License
•2•7•3•1•Updated Jul 13, 2020Jul 13, 2020
draw_rna
Public
Python
•4•1•0•0•Updated May 25, 2020May 25, 2020
eternachat
Public archive
Eterna Chat iOS app
Objective-C
•0•2•6•0•Updated Jul 14, 2016Jul 14, 2016
EteRNA-Script-Interface
Public archive
help users make their own script solving puzzles or scoring lab puzzles in EteRNA.
JavaScript
•6•5•0•0•Updated Aug 12, 2013Aug 12, 2013