Repositories list

• midas-wyss.github.io

  Public
  CSS

  •0•0•0•4•Updated Aug 26, 2023Aug 26, 2023

• engineered-riboregulator-ML

  Public
  Sequence-to-function deep learning frameworks for engineered riboregulators

  stormtoehold-sequencestoehold-optimization

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •4•14•0•2•Updated Aug 3, 2023Aug 3, 2023

• druid

  Public
  DRUg Indication Discoverer

  R

  •

  GNU General Public License v3.0

  •5•0•0•0•Updated Oct 6, 2020Oct 6, 2020

• glycobase

  Public
  GlycoBase - a comprehensive database for glycans

  R

  •3•4•0•1•Updated Sep 6, 2020Sep 6, 2020

• sweetorigins

  Public
  classifierpytorchlanguage-model+ 1glycans

  Jupyter Notebook

  •

  Apache License 2.0

  •2•6•0•0•Updated Apr 9, 2020Apr 9, 2020

• bbb_target_discovery_portal

  Public
  Blood Brain Barrier Target Discovery Portal

  0•0•0•0•Updated Apr 3, 2020Apr 3, 2020

• druid_covid19

  Public
  0•0•0•0•Updated Mar 20, 2020Mar 20, 2020

• shiny_transcriptomics

  Public
  Dashboard for analyzing transcriptomics data in Synapse

  R

  •0•0•0•0•Updated Mar 20, 2020Mar 20, 2020

• drugminer

  Public
  R

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Mar 6, 2020Mar 6, 2020

• shiny_synapse_app_template

  Public
  Shiny app demo using Synapse OAuth 2.0

  R

  •0•0•0•0•Updated Feb 18, 2020Feb 18, 2020

• gates_intestine_metabolomics

  Public
  R

  •1•0•0•0•Updated Feb 13, 2020Feb 13, 2020

• meeting_scheduler

  Public
  R

  •0•0•0•0•Updated Jan 22, 2020Jan 22, 2020

• gedi

  Public
  HTML

  •0•0•0•0•Updated Jan 22, 2020Jan 22, 2020

• sweettalk

  Public
  Deep learning-based language model for glycan sequences

  glycanslanguage-model

  Jupyter Notebook

  •

  Apache License 2.0

  •6•16•0•0•Updated Jan 17, 2020Jan 17, 2020

• wyssalizer

  Public
  R

  •0•0•0•0•Updated Jan 15, 2020Jan 15, 2020

• influenza_biomarkers

  Public
  influenza-infection

  HTML

  •0•0•0•0•Updated Jan 14, 2020Jan 14, 2020

• tovaglieri_metabolites

  Public
  microbiomeinfectionmetabolites

  HTML

  •0•1•0•0•Updated Nov 19, 2019Nov 19, 2019

• jalili_microbiome

  Public
  microbiomeintestine

  HTML

  •0•0•0•0•Updated Nov 19, 2019Nov 19, 2019

• nsmblR

  Public
  nsmblR: Network inference ensemble modeling

  R

  •

  GNU General Public License v3.0

  •2•0•0•0•Updated Jul 31, 2019Jul 31, 2019

• diffnet

  Public
  DiffNet: Differential Networks

  R

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jun 14, 2019Jun 14, 2019

• oranges

  Public
  ORANGES: Over Representation ANalysis of Gene Expression Signatures

  R

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jun 4, 2019Jun 4, 2019

• cauldron

  Public
  Cauldron: a data builder for DRUID

  R

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated May 30, 2019May 30, 2019