Repositories list

• priority-pathogens

  Public
  https://mrc-ide.github.io/priority-pathogens/

  R

  •

  Creative Commons Zero v1.0 Universal

  •2•6•19•3•Updated Jan 27, 2025Jan 27, 2025

• odin-monty

  Public
  TeX

  •0•0•2•2•Updated Jan 27, 2025Jan 27, 2025

• YEP

  Public
  A package for running a dynamic SEIRV model of yellow fever and inferring model parameters

  R

  •

  MIT License

  •1•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• hipercow-py

  Public
  Python

  •

  MIT License

  •0•0•0•1•Updated Jan 27, 2025Jan 27, 2025

• packit

  Public
  Web app for serving outpack and/or orderly2 metadata

  TypeScript

  •

  MIT License

  •1•1•0•5•Updated Jan 27, 2025Jan 27, 2025

• foresite-orderly

  Public
  Orderly implementation of foresite malaria site files

  R

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• naomi

  Public
  Naomi model for subnational HIV estimation

  R

  •

  Other

  •9•9•40•6•Updated Jan 27, 2025Jan 27, 2025

• hipercow

  Public
  🐮💻🐮

  R

  •

  Other

  •0•1•0•2•Updated Jan 25, 2025Jan 25, 2025

• short-course-website

  Public
  The short course website

  PHP

  •0•1•0•0•Updated Jan 25, 2025Jan 25, 2025

• Tapestry

  Public
  C++

  •

  MIT License

  •2•2•0•0•Updated Jan 24, 2025Jan 24, 2025

• YEPaux

  Public
  R package containing auxiliary functions for use with YellowFeverDynamics package.

  R

  •

  MIT License

  •0•1•0•0•Updated Jan 24, 2025Jan 24, 2025

• variantstring

  Public
  Foo

  R

  •

  Other

  •1•0•0•0•Updated Jan 24, 2025Jan 24, 2025

• cema-mrc-hackathon

  Public
  Bridging the Gap Hackathon Quarto Website

  JavaScript

  •4•0•0•0•Updated Jan 24, 2025Jan 24, 2025

• monty

  Public
  R

  •

  Other

  •0•3•2•3•Updated Jan 23, 2025Jan 23, 2025

• cowflu

  Public
  🐮🛃

  R

  •

  Other

  •0•1•0•0•Updated Jan 21, 2025Jan 21, 2025

• NHP_in_brazil

  Public
  R

  •1•1•0•0•Updated Jan 21, 2025Jan 21, 2025

• docker-official-images

  Public
  Shell

  •0•0•0•0•Updated Jan 21, 2025Jan 21, 2025

• grout

  Public
  Geo tile server

  TypeScript

  •0•0•0•1•Updated Jan 21, 2025Jan 21, 2025

• noticeboard

  Public
  DIDE noticeboard website

  HTML

  •4•0•0•2•Updated Jan 21, 2025Jan 21, 2025

• odin2

  Public
  R

  •

  Other

  •0•4•0•0•Updated Jan 21, 2025Jan 21, 2025

• orderly.runner

  Public
  R

  •

  Other

  •0•0•0•2•Updated Jan 21, 2025Jan 21, 2025

• moz.utils

  Public
  R

  •

  Other

  •0•0•2•0•Updated Jan 21, 2025Jan 21, 2025

• popim

  Public
  POPulation IMmunity

  R

  •

  Other

  •0•1•0•0•Updated Jan 20, 2025Jan 20, 2025

• dust2

  Public
  R

  •

  Other

  •0•0•0•0•Updated Jan 17, 2025Jan 17, 2025

• grout-deploy

  Public
  Deployment tool for grout

  0•0•0•1•Updated Jan 17, 2025Jan 17, 2025

• mpoxseir

  Public
  C++

  •

  Other

  •0•1•14•0•Updated Jan 15, 2025Jan 15, 2025

• PGEforge

  Public
  A community-driven resource for enhancing Plasmodium genomic epidemiology analysis

  JavaScript

  •

  MIT License

  •1•2•3•0•Updated Jan 14, 2025Jan 14, 2025

• pyorderly

  Public
  Python

  •

  MIT License

  •0•1•0•3•Updated Jan 13, 2025Jan 13, 2025

• site

  Public
  🌎 malariaverse 🌍 site-files 🌏

  R

  •

  Other

  •2•0•4•0•Updated Jan 13, 2025Jan 13, 2025

• odin

  Public
  ᚩ A DSL for describing and solving differential equations in R

  infrastructure

  R

  •

  Other

  •12•106•77•3•Updated Jan 13, 2025Jan 13, 2025