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    86 repositories

    • docs

      Public
      Source code for the Seqera documentation portal.
      MDX
      •4•1•6•10•Updated Jan 27, 2025Jan 27, 2025

    • wave

      Public
      On-demand containers provisioning service
      dockerkubernetesnextflowcontainerssingularity
      Groovy
      •
      GNU Affero General Public License v3.0
      •4•35•48•24•Updated Jan 27, 2025Jan 27, 2025

    • libseqera

      Public
      Library for Java & Groovy modules shared across Seqera projects
      Groovy
      •
      Apache License 2.0
      •2•2•0•1•Updated Jan 27, 2025Jan 27, 2025

    • tower-cli

      Public
      Nextflow Tower CLI tool
      Java
      •
      Apache License 2.0
      •9•44•77•7•Updated Jan 27, 2025Jan 27, 2025

    • nf-raffle

      Public
      This repository contains code for the nf-raffle pipeline by Seqera, used to conduct raffles at events.
      Nextflow
      •3•1•1•0•Updated Jan 27, 2025Jan 27, 2025

    • cloudinfo

      Public
      Cloud instance type and price information as a service
      Go
      •
      Apache License 2.0
      •37•0•0•12•Updated Jan 24, 2025Jan 24, 2025

    • seqera-kit

      Public
      Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
      Python
      •
      Apache License 2.0
      •7•27•10•4•Updated Jan 24, 2025Jan 24, 2025

    • staticreg

      Public
      A tool to generate a static website from an OCI registry containing all the images and tags the provided user has access to.
      Go
      •
      Apache License 2.0
      •0•0•9•1•Updated Jan 21, 2025Jan 21, 2025

    • nf-dragen

      Public
      POC Nextflow pipeline to run Illumina DRAGEN software
      Nextflow
      •
      Mozilla Public License 2.0
      •6•11•0•2•Updated Jan 17, 2025Jan 17, 2025

    • nf-chai

      Public
      POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction
      pipelinenextflowprotein-structurestructure-prediction
      Nextflow
      •
      Mozilla Public License 2.0
      •2•10•1•0•Updated Jan 16, 2025Jan 16, 2025

    • homebrew-tap

      Public
      Homebrew Tap of Seqera products and tools
      Ruby
      •
      Apache License 2.0
      •1•0•0•0•Updated Jan 14, 2025Jan 14, 2025

    • wave-cli

      Public
      Command line tool for Wave containers provisioning service
      kubernetescondasingularityspackdockercontainers
      Java
      •
      Apache License 2.0
      •3•13•5•2•Updated Jan 14, 2025Jan 14, 2025

    • nf-canary

      Public
      A minimal Nextflow workflow for testing infrastructure.
      Nextflow
      •
      MIT License
      •3•4•3•1•Updated Jan 14, 2025Jan 14, 2025

    • cx-field-tools-installer

      Public
      Unofficial Terraform solution to help clients install Seqera Platform
      HCL
      •
      Apache License 2.0
      •2•3•63•3•Updated Jan 9, 2025Jan 9, 2025

    • nf-tower-aws

      Public
      Repository containing required policies for Nextflow Tower deployment on AWS
      9•7•3•2•Updated Jan 8, 2025Jan 8, 2025

    • nf-aggregate

      Public
      Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform (beta)
      workflowpipelinenextflowqcseqera
      HTML
      •
      Mozilla Public License 2.0
      •10•8•12•6•Updated Jan 7, 2025Jan 7, 2025

    • showcase

      Public
      Infrastructure as code implementation of the seqeralabs/showcase on Seqera
      Shell
      •
      Mozilla Public License 2.0
      •11•11•0•0•Updated Jan 7, 2025Jan 7, 2025

    • forum-discourse-theme-clean

      Public
      A clean theme for discourse
      SCSS
      •
      MIT License
      •8•0•0•0•Updated Jan 3, 2025Jan 3, 2025

    • showcase-automation

      Public
      Python
      •0•0•8•0•Updated Dec 24, 2024Dec 24, 2024

    • tower-agent

      Public
      Agent app that allows connecting remote batch schedulers to Tower Cloud
      nextflow
      Java
      •
      Apache License 2.0
      •5•8•10•0•Updated Dec 16, 2024Dec 16, 2024

    • action-tower-launch

      Public
      GitHub Action to launch a workflow using Seqera Platform
      automationbioinformaticslaunchnextflowpipelinesworkflowstowernf-coregithub-actionsnextflow-tower
      Shell
      •
      Mozilla Public License 2.0
      •1•0•4•1•Updated Dec 3, 2024Dec 3, 2024

    • nf-hello-genomics

      Public
      Nextflow
      •
      Other
      •0•1•1•0•Updated Nov 17, 2024Nov 17, 2024

    • datasets-automation-blog

      Public
      Repository for the Seqera Labs Workflow Automation for Nextflow Tower Pipelines blog post
      Python
      •
      Apache License 2.0
      •0•3•1•1•Updated Nov 15, 2024Nov 15, 2024

    • nf-hello-world

      Public
      Implementation of the hello-world pipeline from https://training.nextflow.io/hello_nextflow/02_hello_world
      Nextflow
      •
      Other
      •0•0•0•0•Updated Nov 15, 2024Nov 15, 2024

    • nf-schema-testing

      Public
      Dummy pipeline for testing variations of the Nextflow schema
      Nextflow
      •
      MIT License
      •0•1•0•2•Updated Nov 6, 2024Nov 6, 2024

    • wave-showcase

      Public
      Examples showing how to configure Nextflow to run with Wave containers provisioning service
      dockernextflowcontainers
      Nextflow
      •5•20•1•0•Updated Nov 2, 2024Nov 2, 2024

    • wave-k8s-deployment

      Public
      Reference deployment for Wave container provisioner
      Shell
      •0•0•1•1•Updated Oct 23, 2024Oct 23, 2024

    • nf-stresstest

      Public
      Nextflow
      •0•0•4•2•Updated Oct 17, 2024Oct 17, 2024

    • seqera_ai_extension

      Public
      ⏩ Continue is the leading open-source AI code assistant. You can connect any models and any context to build custom autocomplete and chat experiences inside VS Code and JetBrains
      TypeScript
      •
      Apache License 2.0
      •2k•0•0•0•Updated Oct 12, 2024Oct 12, 2024

    • migtool

      Public
      No-frills DB migration tool
      Groovy
      •
      Mozilla Public License 2.0
      •1•1•4•4•Updated Sep 18, 2024Sep 18, 2024