fix wrong feature numbers in INSDC output formats #354

oschwengers · Dec 17, 2024 · 5769eb3 · 5769eb3
1 parent 7035d1b
commit 5769eb3
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bakta/io/insdc.py b/bakta/io/insdc.py
@@ -24,7 +24,7 @@ def build_biopython_sequence_list(data: dict, features: Sequence[dict]):
     for seq in data['sequences']:
         sequence_features = []
         if len(features) > 0:
-            [feat for feat in features if feat['sequence'] == seq['id']] if 'sequence' in features[0] else [feat for feat in features if feat['contig'] == seq['id']]  # <1.10.0 compatibility
+            sequence_features = [feat for feat in features if feat['sequence'] == seq['id']] if 'sequence' in features[0] else [feat for feat in features if feat['contig'] == seq['id']]  # <1.10.0 compatibility
         comment = (
             'Annotated with Bakta',
             f"Software: v{bakta.__version__}\n",