bump BLAST+ dependency to v2.14.0

oschwengers · Nov 17, 2023 · b265672 · b265672
1 parent a1d2ffe
commit b265672
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diff --git a/bakta/utils.py b/bakta/utils.py
@@ -46,7 +46,7 @@ def print_version(self):
 DEPENDENCY_PYHMMER = (Version(0, 10, 4), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, 'Pyhmmer', ('python', '-c', 'import pyhmmer; print(pyhmmer.__version__)'), ['--skip-cds', '--skip-sorf'])
 DEPENDENCY_DIAMOND = (Version(2, 1, 8), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, 'Diamond', ('diamond', 'help'), ['--skip-cds', '--skip-sorf'])
 DEPENDENCY_DEEPSIG = (Version(1, 2, 5), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, 'DeepSig', ('deepsig', '--version'), ['--gram ?'])
-DEPENDENCY_BLASTN = (Version(2, 12, 0), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, 'Blastn', ('blastn', '-version'), ['--skip-ori'])
+DEPENDENCY_BLASTN = (Version(2, 14, 0), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, 'Blastn', ('blastn', '-version'), ['--skip-ori'])
 DEPENDENCY_AMRFINDERPLUS = (Version(3, 11, 2), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, 'AMRFinderPlus', ('amrfinder', '--version'), ['--skip-cds'])
 DEPENDENCY_CIRCOS = (Version(0, 69, 8), Version(VERSION_MAX_DIGIT, VERSION_MAX_DIGIT, VERSION_MAX_DIGIT), VERSION_REGEX, 'Circos', ('circos', '--version'), ['--skip-plot'])
 

diff --git a/environment.yml b/environment.yml
@@ -16,6 +16,6 @@ dependencies:
   - piler-cr
   - pyhmmer>=0.10.4
   - diamond>=2.1.8
-  - blast>=2.12.0
+  - blast>=2.14.0
   - ncbi-amrfinderplus>=3.11.2
   - circos>=0.69.8