From 256c8e0afcfea1edc91da65011949b84aeccdb2a Mon Sep 17 00:00:00 2001 From: Joel Vega Date: Wed, 6 Dec 2023 21:43:41 -0400 Subject: [PATCH] docs: Add workflow for documentation (#96) --- .github/workflows/main.yaml | 4 +- .github/workflows/release.yaml | 15 +- conda/dev.yaml | 2 +- conda/release.yaml | 2 +- makim.yaml | 186 +++++++++ mkdocs.yaml | 151 +++++++ poetry.lock | 737 ++++++++++++++++++--------------- pyproject.toml | 53 +-- 8 files changed, 767 insertions(+), 383 deletions(-) create mode 100644 makim.yaml create mode 100644 mkdocs.yaml diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml index 16060f9..63c4012 100644 --- a/.github/workflows/main.yaml +++ b/.github/workflows/main.yaml @@ -75,7 +75,9 @@ jobs: miniforge-variant: Mambaforge - name: Install dependencies - run: poetry install + run: | + poetry config virtualenvs.create false + poetry install - name: Run style checks run: makim tests.linter diff --git a/.github/workflows/release.yaml b/.github/workflows/release.yaml index 7eb06e1..76fdbe2 100644 --- a/.github/workflows/release.yaml +++ b/.github/workflows/release.yaml @@ -35,7 +35,9 @@ jobs: miniforge-variant: Mambaforge - name: Install deps - run: poetry install + run: | + poetry config virtualenvs.create false + poetry install - name: Run semantic release (for tests) if: ${{ github.event_name != 'workflow_dispatch' }} @@ -67,4 +69,13 @@ jobs: -p "@google/semantic-release-replace-plugin" \ semantic-release --ci - + # added for documentation + - name: Generate documentation with changes from semantic-release + run: makim docs.build + + - name: GitHub Pages action + if: ${{ github.event_name == 'workflow_dispatch' }} + uses: peaceiris/actions-gh-pages@v3.5.9 + with: + github_token: ${{ secrets.GITHUB_TOKEN }} + publish_dir: ./build diff --git a/conda/dev.yaml b/conda/dev.yaml index 07636f3..2dc0528 100644 --- a/conda/dev.yaml +++ b/conda/dev.yaml @@ -5,4 +5,4 @@ channels: dependencies: - pip - python 3.8.1 - - poetry >=1.7 + - poetry 1.5.1 diff --git a/conda/release.yaml b/conda/release.yaml index cba96cb..a87a2fd 100644 --- a/conda/release.yaml +++ b/conda/release.yaml @@ -4,5 +4,5 @@ channels: - conda-forge dependencies: - python 3.10.* # min version supported - - poetry >=1.7 + - poetry 1.5.1 - nodejs >=18.17 # used by semantic-release diff --git a/makim.yaml b/makim.yaml new file mode 100644 index 0000000..cb8cc87 --- /dev/null +++ b/makim.yaml @@ -0,0 +1,186 @@ +version: 1.0.0 +shell: bash +groups: + clean: + env-file: .env + targets: + all: + help: Remove build artifacts, compiled files, and cache + run: | + rm -fr build/ + rm -fr dist/ + rm -fr .eggs/ + find . -name '*.egg-info' -exec rm -fr {} + + find . -name '*.egg' -exec rm -f {} + + find . -name '*.pyc' -exec rm -f {} + + find . -name '__pycache__' -exec rm -fr {} + + find . -name '*~' -exec rm -f {} + + rm -f .coverage + rm -fr htmlcov/ + rm -fr .pytest_cache + + docs: + help: Commands for building and previewing the documentation + targets: + build: + help: Build the documentation + run: mkdocs build --config-file docs/mkdocs.yaml + + preview: + help: Preview the documentation + dependencies: + - target: docs-build + run: mkdocs serve --watch docs --config-file docs/mkdocs.yaml + + package: + help: helper commands for handling the package + targets: + build: + help: Build the project + run: poetry build + + tests: + help: Test commands + targets: + linter: + help: Run lint checks + run: | + pre-commit install + pre-commit run --all-files --verbose + + unit: + help: Run tests + args: + params: + help: Extra parameters for pytest + type: str + default: "-vv" + run: pytest -s {{ args.params }} tests + + smoke-1: + help: Run smoke tests for group 1 + dependencies: + - target: docker.killall + run: | + sugar build --verbose + sugar build --verbose --group group1 --all + sugar build --verbose --group group1 + sugar build --verbose --group group1 --services service1-1 + sugar pull --verbose --group group1 --all + sugar pull --verbose --group group1 + sugar pull --verbose --group group1 --services service1-1 + sugar ext start --verbose --group group1 --all --options -d + sugar ext restart --verbose --group group1 --all --options -d + sugar exec --verbose --group group1 --service service1-1 --options -T --cmd env + sugar stop --verbose --group group1 --all + sugar run --verbose --group group1 --service service1-1 --options -T --cmd env + sugar down --verbose --group group1 + + smoke-2: + help: Run smoke tests for group 2 + dependencies: + - target: docker.killall + run: | + sugar build --verbose --group group2 --all + sugar build --verbose --group group2 + sugar build --verbose --group group2 --services service2-1 + sugar pull --verbose --group group2 --all + sugar pull --verbose --group group2 + sugar pull --verbose --group group2 --services service2-1 + sugar ext start --verbose --group group2 --all --options -d + sugar ext restart --verbose --group group2 --all --options -d + sugar exec --verbose --group group2 --service service2-1 --options -T --cmd env + sugar stop --verbose --group group2 --all + sugar run --verbose --group group2 --service service2-1 --options -T --cmd env + sugar down --verbose --group group2 + + smoke-mix: + help: Run smoke tests for group mix + dependencies: + - target: docker.killall + run: | + sugar build --verbose --group group-mix --all + sugar build --verbose --group group-mix + sugar build --verbose --group group-mix --services service1-1,service2-1 + sugar pull --verbose --group group-mix --all + sugar pull --verbose --group group-mix + sugar pull --verbose --group group-mix --services service1-1,service2-1 + sugar ext start --verbose --group group-mix --all --options -d + sugar ext restart --verbose --group group-mix --all --options -d + sugar exec --verbose --group group-mix --service service2-1 --options -T --cmd env + sugar stop --verbose --group group-mix --all + sugar run --verbose --group group-mix --service service2-1 --options -T --cmd env + sugar down --verbose --group group-mix + + smoke-main: + help: Run smoke tests for group main + dependencies: + - target: docker.killall + run: | + # general tests main profile/plugins + sugar build --verbose --group group1 + sugar config --verbose --group group1 + sugar create --verbose --group group1 + sugar ext start --verbose --group group1 --options -d + sugar ext restart --verbose --group group1 --options -d + sugar exec --verbose --group group1 --service service1-1 --options -T --cmd env + sugar images --verbose --group group1 + sugar logs --verbose --group group1 + # port is not complete supported + # sugar port --verbose --group group1 --service service1-1 + sugar ps --verbose --group group1 + sugar pull --verbose --group group1 + sugar push --verbose --group group1 + sugar run --verbose --group group1 --service service1-1 --options -T --cmd env + sugar top --verbose --group group1 + sugar up --verbose --group group1 --options -d + sugar version --verbose + # port is not complete supported + # sugar events --verbose --group group1 --service service1-1 --options --json --dry-run + + smoke-defaults: + help: Run smoke tests for group defaults + dependencies: + - target: docker.killall + run: | + export KXGR_PROJECT_NAME="test-`python -c 'from uuid import uuid4; print(uuid4().hex[:7])'`" + echo $KXGR_PROJECT_NAME + sugar build --verbose --group group-defaults + sugar ext start --verbose --group group-defaults --options -d + sugar ext restart --verbose --group group-defaults --options -d + docker ps|grep $KXGR_PROJECT_NAME + sugar ext stop --verbose --group group-defaults + + smoke-final: + help: Run final smoke tests + dependencies: + - target: docker.killall + run: | + sugar ext restart --verbose --group group-defaults --options -d + sugar pause --verbose --group group1 + sugar unpause --verbose --group group1 + sugar kill --verbose --group group1 + sugar stop --verbose --group group1 + sugar rm --verbose --group group1 --options --force + sugar down --verbose --group group1 + + smoke: + help: Run final smoke tests + dependencies: + - target: docker.killall + - target: tests.smoke-1 + - target: tests.smoke-2 + - target: tests.smoke-mix + - target: tests.smoke-main + - target: tests.smoke-defaults + - target: tests.smoke-final + run: | + sugar --help + sugar --version + + docker: + help: Commands for docker + targets: + killall: + help: Kill all running Docker containers + run: docker kill `docker ps -q` || true diff --git a/mkdocs.yaml b/mkdocs.yaml new file mode 100644 index 0000000..1b7a082 --- /dev/null +++ b/mkdocs.yaml @@ -0,0 +1,151 @@ +site_name: ContainersSugar +site_url: https://osl-incubator.github.io/containers-sugar +repo_url: https://github.com/osl-incubator/containers-sugar +docs_dir: ./docs +site_dir: ./build +# extra_css: +# - stylesheets/extra.css +# Page tree +nav: + - index.md + - Installation: installation.md + - Changelog: changelog.md + - Contributing: contributing.md +# - API: api/references.md + - Notebook page: example.ipynb +theme: + name: material + features: + - content.code.annotate + - content.tabs.link + - header.autohide + - navigation.indexes + - navigation.instant + - search.highlight + - search.share + - search.suggest + icon: + repo: fontawesome/brands/github + logo: images/logo.png + favicon: images/favicon.ico + palette: + scheme: slate + primary: white + accent: lime + # custom_dir: docs/overrides +plugins: + - search + - macros + # - autorefs + # - exclude: + # glob: + # - backends/template.md + - mkdocstrings: + enable_inventory: true + handlers: + python: + paths: [../src] + + import: + - https://docs.python.org/3/objects.inv + options: + docstring_style: numpy + filters: + - "!^Bounds" + - "!^__class__" + - "!^_filter_with_like" + - "!^_find_backends" + - "!^_key$" + - "!^_literal_value_hash_key" + - "!^_log" + - "!^_nbytes" + - "!^_safe_name$" + - "!^_schema_from_csv" + - "!^_to_geodataframe" + - "!^_tuplize" + - "!^ast_schema" + - "!^backend_table_type" + - "!^bounds$" + - "!^column$" + - "!^compiler$" + - "!^context_class" + - "!^database_class" + - "!^do_connect" + - "!^fetch_from_cursor" + - "!^get_schema" + - "!^largest$" + - "!^reconnect" + - "!^select_builder_class" + - "!^select_class" + - "!^table_class$" + - "!^table_expr_class" + - "!^translator_class" + - "!^Options$" + show_category_heading: true + show_root_full_path: false + show_root_heading: true + show_root_toc_entry: true + show_source: false + show_modules: true + - mkdocs-jupyter: + execute: false + ignore: + - "*.py" + # execute_ignore: "tutorial/*Geospatial*.ipynb" + include_source: true + theme: dark + - literate-nav +markdown_extensions: + - admonition + - attr_list + - codehilite + - def_list + - footnotes + - md_in_html + - meta + - pymdownx.emoji: + emoji_index: !!python/name:materialx.emoji.twemoji + emoji_generator: !!python/name:materialx.emoji.to_svg + options: + custom_icons: + - docs/static/icons + - pymdownx.details + - pymdownx.highlight + - pymdownx.inlinehilite + - pymdownx.magiclink: + provider: github + repo_url_shortener: true + - pymdownx.saneheaders + - pymdownx.snippets + - pymdownx.superfences + - pymdownx.tabbed: + alternate_style: true + - tables + - toc +extra: + project_name: "Containers-Sugar" + team: + - name: "Active maintainers" + members: + - xmnlab + - joel5vega + - name: "Former maintainers" + members: + - xmnlab + social: + - icon: fontawesome/brands/twitter + link: https://twitter.com/xmnlab + - icon: fontawesome/brands/github + link: https://github.com/osl-incubator/containers-sugar + support_levels: + supported: + icon: :material-check-decagram:{ .verified } + description: Tested in CI. If this doesn't work for you, please [file an issue](https://github.com/arxlang/astx/issues/new). + bug: + icon: :material-bug:{ .bug } + description: Should work but doesn't because upstream is broken. Supported on a best-effort basis. + unsupported: + icon: :material-cancel:{ .cancel } + description: Unlikely to ever be supported or no upstream support. + +copyright: "Copyright © 2023, Contaner-sugar Team" diff --git a/poetry.lock b/poetry.lock index ea05338..ddfe812 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.7.0 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. [[package]] name = "appnope" @@ -136,13 +136,13 @@ css = ["tinycss2 (>=1.1.0,<1.3)"] [[package]] name = "certifi" -version = "2023.7.22" +version = "2023.11.17" description = "Python package for providing Mozilla's CA Bundle." optional = false python-versions = ">=3.6" files = [ - {file = "certifi-2023.7.22-py3-none-any.whl", hash = "sha256:92d6037539857d8206b8f6ae472e8b77db8058fec5937a1ef3f54304089edbb9"}, - {file = "certifi-2023.7.22.tar.gz", hash = "sha256:539cc1d13202e33ca466e88b2807e29f4c13049d6d87031a3c110744495cb082"}, + {file = "certifi-2023.11.17-py3-none-any.whl", hash = "sha256:e036ab49d5b79556f99cfc2d9320b34cfbe5be05c5871b51de9329f0603b0474"}, + {file = "certifi-2023.11.17.tar.gz", hash = "sha256:9b469f3a900bf28dc19b8cfbf8019bf47f7fdd1a65a1d4ffb98fc14166beb4d1"}, ] [[package]] @@ -363,13 +363,13 @@ test = ["pytest"] [[package]] name = "compose-go" -version = "2.23.0" +version = "2.23.3" description = "Docker Compose v2 (GoLang) wrapped in a Python Package" optional = false python-versions = ">=3.7.0,<4.0.0" files = [ - {file = "compose_go-2.23.0-cp312-cp312-manylinux_2_35_x86_64.whl", hash = "sha256:bc52d4468c414312b57dbd41aed3f8ff947d8b3ed36d0061d6f54539c101a53f"}, - {file = "compose_go-2.23.0.tar.gz", hash = "sha256:d0bc049c31f47198b4300290e7856788d71a2a307e5bb8258ec15937c4a6e3a4"}, + {file = "compose_go-2.23.3-cp312-cp312-manylinux_2_35_x86_64.whl", hash = "sha256:102c81555deb2c0d2cc938615290f771af4751011134cd37be5f12f2dac83052"}, + {file = "compose_go-2.23.3.tar.gz", hash = "sha256:a98cf7411615f1d5a0bafd04674ff54a28e22cc04b07958d9faec537479efe73"}, ] [[package]] @@ -501,13 +501,13 @@ files = [ [[package]] name = "exceptiongroup" -version = "1.1.3" +version = "1.2.0" description = "Backport of PEP 654 (exception groups)" optional = false python-versions = ">=3.7" files = [ - {file = "exceptiongroup-1.1.3-py3-none-any.whl", hash = "sha256:343280667a4585d195ca1cf9cef84a4e178c4b6cf2274caef9859782b567d5e3"}, - {file = "exceptiongroup-1.1.3.tar.gz", hash = "sha256:097acd85d473d75af5bb98e41b61ff7fe35efe6675e4f9370ec6ec5126d160e9"}, + {file = "exceptiongroup-1.2.0-py3-none-any.whl", hash = "sha256:4bfd3996ac73b41e9b9628b04e079f193850720ea5945fc96a08633c66912f14"}, + {file = "exceptiongroup-1.2.0.tar.gz", hash = "sha256:91f5c769735f051a4290d52edd0858999b57e5876e9f85937691bd4c9fa3ed68"}, ] [package.extras] @@ -605,15 +605,29 @@ gitdb = ">=4.0.1,<5" [package.extras] test = ["black", "coverage[toml]", "ddt (>=1.1.1,!=1.4.3)", "mock", "mypy", "pre-commit", "pytest", "pytest-cov", "pytest-instafail", "pytest-subtests", "pytest-sugar"] +[[package]] +name = "griffe" +version = "0.38.1" +description = "Signatures for entire Python programs. Extract the structure, the frame, the skeleton of your project, to generate API documentation or find breaking changes in your API." +optional = false +python-versions = ">=3.8" +files = [ + {file = "griffe-0.38.1-py3-none-any.whl", hash = "sha256:334c79d3b5964ade65c05dfcaf53518c576dedd387aaba5c9fd71212f34f1483"}, + {file = "griffe-0.38.1.tar.gz", hash = "sha256:bd68d7da7f3d87bc57eb9962b250db123efd9bbcc06c11c1a91b6e583b2a9361"}, +] + +[package.dependencies] +colorama = ">=0.4" + [[package]] name = "identify" -version = "2.5.31" +version = "2.5.32" description = "File identification library for Python" optional = false python-versions = ">=3.8" files = [ - {file = "identify-2.5.31-py2.py3-none-any.whl", hash = "sha256:90199cb9e7bd3c5407a9b7e81b4abec4bb9d249991c79439ec8af740afc6293d"}, - {file = "identify-2.5.31.tar.gz", hash = "sha256:7736b3c7a28233637e3c36550646fc6389bedd74ae84cb788200cc8e2dd60b75"}, + {file = "identify-2.5.32-py2.py3-none-any.whl", hash = "sha256:0b7656ef6cba81664b783352c73f8c24b39cf82f926f78f4550eda928e5e0545"}, + {file = "identify-2.5.32.tar.gz", hash = "sha256:5d9979348ec1a21c768ae07e0a652924538e8bce67313a73cb0f681cf08ba407"}, ] [package.extras] @@ -621,31 +635,31 @@ license = ["ukkonen"] [[package]] name = "idna" -version = "3.4" +version = "3.6" description = "Internationalized Domain Names in Applications (IDNA)" optional = false python-versions = ">=3.5" files = [ - {file = "idna-3.4-py3-none-any.whl", hash = "sha256:90b77e79eaa3eba6de819a0c442c0b4ceefc341a7a2ab77d7562bf49f425c5c2"}, - {file = "idna-3.4.tar.gz", hash = "sha256:814f528e8dead7d329833b91c5faa87d60bf71824cd12a7530b5526063d02cb4"}, + {file = "idna-3.6-py3-none-any.whl", hash = "sha256:c05567e9c24a6b9faaa835c4821bad0590fbb9d5779e7caa6e1cc4978e7eb24f"}, + {file = "idna-3.6.tar.gz", hash = "sha256:9ecdbbd083b06798ae1e86adcbfe8ab1479cf864e4ee30fe4e46a003d12491ca"}, ] [[package]] name = "importlib-metadata" -version = "6.8.0" +version = "7.0.0" description = "Read metadata from Python packages" optional = false python-versions = ">=3.8" files = [ - {file = "importlib_metadata-6.8.0-py3-none-any.whl", hash = "sha256:3ebb78df84a805d7698245025b975d9d67053cd94c79245ba4b3eb694abe68bb"}, - {file = "importlib_metadata-6.8.0.tar.gz", hash = "sha256:dbace7892d8c0c4ac1ad096662232f831d4e64f4c4545bd53016a3e9d4654743"}, + {file = "importlib_metadata-7.0.0-py3-none-any.whl", hash = "sha256:d97503976bb81f40a193d41ee6570868479c69d5068651eb039c40d850c59d67"}, + {file = "importlib_metadata-7.0.0.tar.gz", hash = "sha256:7fc841f8b8332803464e5dc1c63a2e59121f46ca186c0e2e182e80bf8c1319f7"}, ] [package.dependencies] zipp = ">=0.5" [package.extras] -docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] +docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-lint"] perf = ["ipython"] testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"] @@ -680,13 +694,13 @@ files = [ [[package]] name = "ipykernel" -version = "6.26.0" +version = "6.27.1" description = "IPython Kernel for Jupyter" optional = false python-versions = ">=3.8" files = [ - 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