run_tests.yml

name: run-tests
on:
  push:
    branches:
      - '**master**'
      - '**_run_ci**'
      - '**release**'
  pull_request:
    types: [opened, reopened, labeled, synchronize]
  workflow_dispatch:

jobs:
  test:
    if: |
       github.event_name != 'pull_request' ||
       (github.event.action == 'labeled' && github.event.label.name == 'run_ci') ||
       (github.event_name == 'pull_request' && !contains(github.event.pull_request.labels.*.name, 'no_ci'))
    strategy:
      matrix:
        os: [ubuntu-latest, windows-latest, macos-latest, macos-13]

      fail-fast: false

    runs-on: ${{ matrix.os }}
    steps:
      - uses: actions/checkout@v4
      - uses: conda-incubator/setup-miniconda@v3
        with:
          python-version: '3.10'
          channels: conda-forge,defaults
          channel-priority: true

      - name: Install llvm on MacOS
        if: startsWith(matrix.os, 'macos')
        shell: bash -l {0}
        env:
          # Homebrew location is different on Intel Mac
          LLVM_DIR: ${{ (matrix.os == 'macos-13') && '/usr/local/opt/llvm' || '/opt/homebrew/opt/llvm' }}
        run: |
          brew install llvm
          echo CC="${LLVM_DIR}/bin/clang" >> $GITHUB_ENV
          echo LDFLAGS="-L${LLVM_DIR}/lib $LDFLAGS" >> $GITHUB_ENV
          echo CPPFLAGS="-I${LLVM_DIR}/include $CPPFLAGS" >> $GITHUB_ENV

      - name: Setup MSVC env on Windows
        if: startsWith(matrix.os, 'windows')
        uses: bus1/cabuild/action/msdevshell@v1
        with:
          architecture: x64
      - shell: bash -l {0}
        run: |
          echo "CC=cl.exe" >> $GITHUB_ENV
          echo "CC_LD=link.exe" >> $GITHUB_ENV
      # - name: Setup MSVC env on Windows
      #   if: startsWith(matrix.os, 'windows')
      #   shell: bash -l {0}
      #   env:
      #     MSVC_BIN: 'C:\Program Files\Microsoft Visual Studio\2022\Enterprise\VC\Tools\MSVC\14.41.34120\bin\HostX64\x64'
      #   run: |
      #     echo "CC=${MSVC_BIN}\cl.exe" >> $GITHUB_ENV
      #     echo "CC_LD=${MSVC_BIN}\link.exe" >> $GITHUB_ENV

      - name: Update pip and install dependencies
        shell: bash -l {0}
        run: |
          python -m pip install --upgrade pip
          python -m pip install -r tests_and_analysis/ci_requirements.txt

      - name: Run tests, skip Python 3.11 unless workflow dispatch
        if: github.event_name != 'workflow_dispatch'
        env:
          TOX_SKIP_ENV: '.*?(py311).*?'
        shell: bash -l {0}
        run: python -m tox
      - name: Run tests, workflow dispatch so test all Python versions
        if: github.event_name == 'workflow_dispatch'
        shell: bash -l {0}
        run: python -m tox

      - name: Upload test results
        if: always()
        uses: actions/upload-artifact@v4
        with:
          name: Unit test results ${{ matrix.os }}
          path: tests_and_analysis/test/reports/junit_report*.xml
      - name: Publish Codacy coverage
        uses: codacy/codacy-coverage-reporter-action@v1
        if: startsWith(matrix.os, 'ubuntu')
        with:
          project-token: ${{ secrets.CODACY_PROJECT_TOKEN }}
          coverage-reports: tests_and_analysis/test/reports/coverage*.xml
      - uses: codecov/codecov-action@v3
        if: startsWith(matrix.os, 'ubuntu')
        with:
          files: tests_and_analysis/test/reports/coverage*.xml

  test-docs:
    runs-on: ubuntu-latest
    if: success() || failure()
    steps:
      - uses: actions/checkout@v4
      - uses: conda-incubator/setup-miniconda@v3
        with:
          python-version: '3.10'
          channels: conda-forge,defaults
          channel-priority: true
      - name: Update pip and install dependencies
        shell: bash -l {0}
        run: |
          python -m pip install --upgrade pip
          python -m pip install -r tests_and_analysis/ci_requirements.txt
          python -m pip install -r doc/requirements.txt
          python -m pip install .[matplotlib,phonopy_reader,brille]
      - name: Run Sphinx doctests
        working-directory: ./doc
        shell: bash -l {0}
        run: sphinx-build -c source -b doctest source .
      - name: Upload docstest results
        if: success() || failure()
        uses: actions/upload-artifact@v4
        with:
          name: Doctest results
          path: doc/output.txt

  publish-test-results:
    needs: test
    runs-on: ubuntu-latest
    if: success() || failure()
    steps:
      - name: Download Artifacts
        uses: actions/download-artifact@v4
        with:
          path: artifacts
      - name: Publish test results
        uses: EnricoMi/publish-unit-test-result-action@v2
        with:
          junit_files: artifacts/**/junit_report*.xml