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update makefile
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Lioscro committed Oct 29, 2019
1 parent b489520 commit 154a41e
Showing 1 changed file with 3 additions and 15 deletions.
18 changes: 3 additions & 15 deletions Makefile
Original file line number Diff line number Diff line change
@@ -1,16 +1,4 @@
.PHONY : install test check build clean upload-test

KALLISTO_VERSION=v0.46.0
BUSTOOLS_VERSION=v0.39.3

install:
wget https://github.com/pachterlab/kallisto/releases/download/v0.46.0/kallisto_linux-$(KALLISTO_VERSION).tar.gz -O kallisto.tar.gz
tar -xvzf kallisto.tar.gz
sudo cp kallisto/kallisto /usr/local/bin

wget https://github.com/BUStools/bustools/releases/download/v0.39.3/bustools_linux-$(BUSTOOLS_VERSION).tar.gz -O bustools.tar.gz
tar -xvzf bustools.tar.gz
sudo cp bustools/bustools /usr/local/bin
.PHONY : install test check build clean push_release

test:
nosetests --verbose --with-coverage --cover-package kb_python
Expand All @@ -36,5 +24,5 @@ bump_minor:
bump_major:
bumpversion major

upload-test:
twine upload --repository-url https://test.pypi.org/legacy/ dist/*
push_release:
git push && git push --tags

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