From 7accfa4b43c656d6181ed7a24b9c896c19138f72 Mon Sep 17 00:00:00 2001 From: Sina Booeshaghi Date: Tue, 24 Sep 2024 16:20:38 -0700 Subject: [PATCH] added list of checks to the seqspec tool --- docs/SEQSPEC_TOOL.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docs/SEQSPEC_TOOL.md b/docs/SEQSPEC_TOOL.md index e5c9135..1e355e7 100644 --- a/docs/SEQSPEC_TOOL.md +++ b/docs/SEQSPEC_TOOL.md @@ -87,6 +87,8 @@ A list of checks performed: 13. Check that the lengths of the `sequence` in every region object is between the `min_len` and `max_len` length. 14. Check that the number of files in each `File` object for all `Read` objects are the same length. +Below are a list of example errors one may encounter when checking a spec: + ```bash # The "assay" value was not specified in the spec [error 1] None is not of type 'string' in spec['assay']