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Extract expression matrix (obs_norm) at the gene level #251

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tiagobrc opened this issue Aug 21, 2020 · 0 comments
Open

Extract expression matrix (obs_norm) at the gene level #251

tiagobrc opened this issue Aug 21, 2020 · 0 comments

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@tiagobrc
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tiagobrc commented Aug 21, 2020

In older versions (following the old walkthrough) of sleuth, I would generate the analysis using gene.mode = T and the whole downstream analysis would be collapsed at the gene level.

Following the new walkthrough, we are able to get the significant genes but when extracting obs.norm, I get the transcripts at the rows instead of genes. Is there any workaround this ?

Thanks

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