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DESCRIPTION
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Package: ipmr
Title: Integral Projection Models
Version: 0.0.7
Authors@R: c(
person(given = "Sam",
family = "Levin",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-3289-9925")),
person(given = "Aldo",
family = "Compagnoni",
email = "[email protected]",
role = "aut"),
person(given = "Dylan",
family = "Childs",
email = "[email protected]",
role = "aut"),
person(given = "Sanne",
family = "Evers",
email = "[email protected]",
role = "aut"),
person(given = "Roberto",
family = "Salguero-Gomez",
email = "[email protected]",
role = "aut"),
person(given = "Tiffany",
family = "Knight",
email = "[email protected]",
role = "aut"),
person(given = "Eric",
family = "Scott",
email = "[email protected]",
role = "ctb"))
Description: Flexibly implements Integral Projection Models using a
mathematical(ish) syntax. This package will not help with the vital rate
modeling process, but will help convert those regression models into an
IPM. 'ipmr' handles density dependence and environmental stochasticity, with a
couple of options for implementing the latter. In addition, provides functions
to avoid unintentional eviction of individuals from models. Additionally,
provides model diagnostic tools, plotting functionality,
stochastic/deterministic simulations, and analysis tools.
Integral projection models are described in depth by Easterling et al. (2000)
<doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013)
<doi:10.1111/2041-210X.12146>, Rees et al. (2014) <doi:10.1111/1365-2656.12178>,
and Metcalf et al. (2015) <doi:10.1111/2041-210X.12405>.
Williams et al. (2012) <doi:10.1890/11-2147.1> discuss the problem of
unintentional eviction.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Suggests:
covr,
knitr,
lme4,
mvtnorm,
rmarkdown,
roxygen2,
spelling,
testthat,
tools
VignetteBuilder: knitr
Language: en-US
Imports:
graphics,
grDevices,
magrittr,
methods,
purrr (>= 0.3.0),
rlang (>= 0.3.0),
stats,
utils,
Rcpp
Depends: R (>= 3.4)
RoxygenNote: 7.2.2
Config/testthat/parallel: true
Config/testthat/edition: 3
LinkingTo:
Rcpp
URL: https://padrinoDB.github.io/ipmr/, https://github.com/padrinoDB/ipmr
BugReports: https://github.com/padrinoDB/ipmr/issues