NAMESPACE

# Generated by roxygen2: do not edit by hand
export(add_gbm_model)
export(calc_llh)
export(calculate_mh)
export(conv_snv_matrix_to_df)
export(decompose)
export(find_data_setting)
export(get_Sig3_llh_from_wgs_data)
export(get_base_matrix)
export(get_catalog)
export(get_exps_mmrd)
export(get_inter_tt_suppl)
export(get_sig_exps)
export(get_threshold)
export(get_trinuc_counts)
export(get_trinuc_norm)
export(get_tumor_types_for_signature)
export(get_wgs_data_for_llh)
export(has_model)
export(info_stat)
export(list_data_options)
export(list_tumor_types)
export(lite_df)
export(llh_max_characteristics)
export(llh_max_characteristics_wgs_data)
export(make_matrix)
export(match_to_catalog)
export(mh_from_vcf)
export(mmej_nhej_indels_from_vcfs)
export(overlap_repeats)
export(plot_detailed)
export(plot_summary)
export(plot_tribase_dist)
export(predict_mmrd)
export(predict_mva)
export(predict_prob)
export(quick_simulation)
export(remove_gbm_model)
export(run)
export(run_overlap_repeats)
export(sen_fpr)
export(simulate_from_wgs)
export(subsample)
export(subsample_id)
export(tune_gbm_model)
export(tune_new_gbm)